Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pfdn2O70591 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pfdn2O70591 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Pfdn2O70591 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pfdn2O70591 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pfdn2O70591 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Pfdn2O70591 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pfdn2O70591 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.56■□□□□ 0.72
Pfdn2O70591 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pfdn2O70591 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pfdn2O70591 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pfdn2O70591 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pfdn2O70591 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pfdn2O70591 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pfdn2O70591 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pfdn2O70591 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pfdn2O70591 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pfdn2O70591 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pfdn2O70591 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pfdn2O70591 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pfdn2O70591 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pfdn2O70591 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pfdn2O70591 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pfdn2O70591 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pfdn2O70591 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Pfdn2O70591 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pfdn2O70591 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pfdn2O70591 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn2O70591 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn2O70591 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Pfdn2O70591 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.49■□□□□ 0.71
Pfdn2O70591 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pfdn2O70591 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.48■□□□□ 0.71
Pfdn2O70591 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn2O70591 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn2O70591 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn2O70591 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn2O70591 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn2O70591 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.45■□□□□ 0.7
Pfdn2O70591 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn2O70591 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn2O70591 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pfdn2O70591 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn2O70591 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn2O70591 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn2O70591 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn2O70591 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pfdn2O70591 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn2O70591 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn2O70591 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn2O70591 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn2O70591 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn2O70591 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pfdn2O70591 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn2O70591 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn2O70591 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn2O70591 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn2O70591 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn2O70591 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn2O70591 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn2O70591 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn2O70591 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn2O70591 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.42■□□□□ 0.7
Pfdn2O70591 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pfdn2O70591 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pfdn2O70591 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn2O70591 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn2O70591 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn2O70591 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pfdn2O70591 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pfdn2O70591 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn2O70591 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn2O70591 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn2O70591 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pfdn2O70591 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pfdn2O70591 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.38■□□□□ 0.69
Pfdn2O70591 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn2O70591 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pfdn2O70591 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pfdn2O70591 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn2O70591 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn2O70591 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn2O70591 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pfdn2O70591 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn2O70591 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn2O70591 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pfdn2O70591 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn2O70591 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pfdn2O70591 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pfdn2O70591 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.35■□□□□ 0.69
Pfdn2O70591 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.35■□□□□ 0.69
Pfdn2O70591 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pfdn2O70591 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn2O70591 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pfdn2O70591 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pfdn2O70591 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.34■□□□□ 0.69
Pfdn2O70591 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pfdn2O70591 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pfdn2O70591 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Pfdn2O70591 Gm24804-201ENSMUST00000174982 85 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms