Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3727J3QM54 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3727J3QM54 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3727J3QM54 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3727J3QM54 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3727J3QM54 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm3727J3QM54 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Gm3727J3QM54 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.2■□□□□ 0.82
Gm3727J3QM54 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3727J3QM54 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.2■□□□□ 0.82
Gm3727J3QM54 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.2■□□□□ 0.82
Gm3727J3QM54 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3727J3QM54 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3727J3QM54 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3727J3QM54 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3727J3QM54 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3727J3QM54 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3727J3QM54 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3727J3QM54 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3727J3QM54 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3727J3QM54 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3727J3QM54 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.17■□□□□ 0.82
Gm3727J3QM54 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3727J3QM54 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3727J3QM54 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3727J3QM54 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3727J3QM54 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3727J3QM54 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3727J3QM54 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3727J3QM54 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3727J3QM54 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3727J3QM54 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Gm3727J3QM54 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3727J3QM54 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3727J3QM54 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.12■□□□□ 0.81
Gm3727J3QM54 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Gm3727J3QM54 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3727J3QM54 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3727J3QM54 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.11■□□□□ 0.81
Gm3727J3QM54 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Gm3727J3QM54 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3727J3QM54 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3727J3QM54 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3727J3QM54 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3727J3QM54 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3727J3QM54 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.09■□□□□ 0.81
Gm3727J3QM54 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3727J3QM54 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3727J3QM54 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Gm3727J3QM54 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3727J3QM54 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3727J3QM54 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Gm3727J3QM54 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Gm3727J3QM54 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Gm3727J3QM54 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.08■□□□□ 0.8
Gm3727J3QM54 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3727J3QM54 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3727J3QM54 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3727J3QM54 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3727J3QM54 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3727J3QM54 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Gm3727J3QM54 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
Gm3727J3QM54 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3727J3QM54 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3727J3QM54 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3727J3QM54 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3727J3QM54 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3727J3QM54 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3727J3QM54 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3727J3QM54 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Gm3727J3QM54 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Gm3727J3QM54 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3727J3QM54 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3727J3QM54 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.02■□□□□ 0.8
Gm3727J3QM54 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.02■□□□□ 0.79
Gm3727J3QM54 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Gm3727J3QM54 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm3727J3QM54 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20■□□□□ 0.79
Gm3727J3QM54 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3727J3QM54 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm3727J3QM54 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Gm3727J3QM54 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3727J3QM54 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3727J3QM54 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm3727J3QM54 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Gm3727J3QM54 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3727J3QM54 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3727J3QM54 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Gm3727J3QM54 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3727J3QM54 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3727J3QM54 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3727J3QM54 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Gm3727J3QM54 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3727J3QM54 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm3727J3QM54 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.96■□□□□ 0.79
Gm3727J3QM54 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Gm3727J3QM54 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3727J3QM54 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm3727J3QM54 Gm27322-201ENSMUST00000184007 104 ntBASIC19.96■□□□□ 0.79
Gm3727J3QM54 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms