Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.65■□□□□ 0.9
Cldn20G5E8X0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn20G5E8X0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cldn20G5E8X0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cldn20G5E8X0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Cldn20G5E8X0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.64■□□□□ 0.89
Cldn20G5E8X0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn20G5E8X0 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.64■□□□□ 0.89
Cldn20G5E8X0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn20G5E8X0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn20G5E8X0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Cldn20G5E8X0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn20G5E8X0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn20G5E8X0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.62■□□□□ 0.89
Cldn20G5E8X0 Zfp131-205ENSMUST00000223812 663 ntBASIC20.61■□□□□ 0.89
Cldn20G5E8X0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn20G5E8X0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.61■□□□□ 0.89
Cldn20G5E8X0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn20G5E8X0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn20G5E8X0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn20G5E8X0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.6■□□□□ 0.89
Cldn20G5E8X0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn20G5E8X0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cldn20G5E8X0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cldn20G5E8X0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cldn20G5E8X0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn20G5E8X0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cldn20G5E8X0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.57■□□□□ 0.88
Cldn20G5E8X0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cldn20G5E8X0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn20G5E8X0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cldn20G5E8X0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cldn20G5E8X0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn20G5E8X0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn20G5E8X0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cldn20G5E8X0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn20G5E8X0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn20G5E8X0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn20G5E8X0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn20G5E8X0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn20G5E8X0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn20G5E8X0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Cldn20G5E8X0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn20G5E8X0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn20G5E8X0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn20G5E8X0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn20G5E8X0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn20G5E8X0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn20G5E8X0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn20G5E8X0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn20G5E8X0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn20G5E8X0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn20G5E8X0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn20G5E8X0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cldn20G5E8X0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn20G5E8X0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn20G5E8X0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn20G5E8X0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn20G5E8X0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn20G5E8X0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.49■□□□□ 0.87
Cldn20G5E8X0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cldn20G5E8X0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn20G5E8X0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn20G5E8X0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn20G5E8X0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.48■□□□□ 0.87
Cldn20G5E8X0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.48■□□□□ 0.87
Cldn20G5E8X0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn20G5E8X0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn20G5E8X0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn20G5E8X0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn20G5E8X0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
Cldn20G5E8X0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn20G5E8X0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn20G5E8X0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn20G5E8X0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn20G5E8X0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn20G5E8X0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cldn20G5E8X0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.43■□□□□ 0.86
Cldn20G5E8X0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn20G5E8X0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.43■□□□□ 0.86
Cldn20G5E8X0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn20G5E8X0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cldn20G5E8X0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn20G5E8X0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn20G5E8X0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn20G5E8X0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Cldn20G5E8X0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn20G5E8X0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn20G5E8X0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn20G5E8X0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn20G5E8X0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn20G5E8X0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cldn20G5E8X0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.38■□□□□ 0.85
Cldn20G5E8X0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cldn20G5E8X0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn20G5E8X0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cldn20G5E8X0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn20G5E8X0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.36■□□□□ 0.85
Cldn20G5E8X0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cldn20G5E8X0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms