Protein–RNA interactions for Protein: F7BCN9

Gm28038, Predicted gene, 28038 (Fragment), mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28038F7BCN9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28038F7BCN9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28038F7BCN9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Gm28038F7BCN9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28038F7BCN9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28038F7BCN9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28038F7BCN9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm28038F7BCN9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28038F7BCN9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28038F7BCN9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28038F7BCN9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28038F7BCN9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28038F7BCN9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28038F7BCN9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28038F7BCN9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm28038F7BCN9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28038F7BCN9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28038F7BCN9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28038F7BCN9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28038F7BCN9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm28038F7BCN9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28038F7BCN9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28038F7BCN9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28038F7BCN9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28038F7BCN9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28038F7BCN9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28038F7BCN9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28038F7BCN9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28038F7BCN9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28038F7BCN9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28038F7BCN9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28038F7BCN9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28038F7BCN9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm28038F7BCN9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Gm28038F7BCN9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.47■□□□□ 0.39
Gm28038F7BCN9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm28038F7BCN9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm28038F7BCN9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28038F7BCN9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28038F7BCN9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28038F7BCN9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Gm28038F7BCN9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28038F7BCN9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28038F7BCN9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28038F7BCN9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28038F7BCN9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gm28038F7BCN9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28038F7BCN9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28038F7BCN9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gm28038F7BCN9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Gm28038F7BCN9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Gm28038F7BCN9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28038F7BCN9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28038F7BCN9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.43■□□□□ 0.38
Gm28038F7BCN9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gm28038F7BCN9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.42■□□□□ 0.38
Gm28038F7BCN9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Gm28038F7BCN9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28038F7BCN9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gm28038F7BCN9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28038F7BCN9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28038F7BCN9 Gm24804-201ENSMUST00000174982 85 ntBASIC17.41■□□□□ 0.38
Gm28038F7BCN9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gm28038F7BCN9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Gm28038F7BCN9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gm28038F7BCN9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28038F7BCN9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28038F7BCN9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gm28038F7BCN9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Gm28038F7BCN9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gm28038F7BCN9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.39■□□□□ 0.37
Gm28038F7BCN9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.39■□□□□ 0.37
Gm28038F7BCN9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28038F7BCN9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28038F7BCN9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm28038F7BCN9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28038F7BCN9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Gm28038F7BCN9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28038F7BCN9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28038F7BCN9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28038F7BCN9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28038F7BCN9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28038F7BCN9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.37■□□□□ 0.37
Gm28038F7BCN9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28038F7BCN9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28038F7BCN9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28038F7BCN9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28038F7BCN9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28038F7BCN9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28038F7BCN9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28038F7BCN9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Gm28038F7BCN9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28038F7BCN9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28038F7BCN9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28038F7BCN9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28038F7BCN9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28038F7BCN9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28038F7BCN9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28038F7BCN9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28038F7BCN9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms