Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv17A0A140T8P8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Trbv17A0A140T8P8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trbv17A0A140T8P8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv17A0A140T8P8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv17A0A140T8P8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv17A0A140T8P8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trbv17A0A140T8P8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv17A0A140T8P8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv17A0A140T8P8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv17A0A140T8P8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv17A0A140T8P8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv17A0A140T8P8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv17A0A140T8P8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.15■□□□□ 0.5
Trbv17A0A140T8P8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv17A0A140T8P8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trbv17A0A140T8P8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv17A0A140T8P8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Trbv17A0A140T8P8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv17A0A140T8P8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv17A0A140T8P8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.13■□□□□ 0.49
Trbv17A0A140T8P8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.13■□□□□ 0.49
Trbv17A0A140T8P8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
Trbv17A0A140T8P8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trbv17A0A140T8P8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.12■□□□□ 0.49
Trbv17A0A140T8P8 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.12■□□□□ 0.49
Trbv17A0A140T8P8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv17A0A140T8P8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv17A0A140T8P8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trbv17A0A140T8P8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv17A0A140T8P8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv17A0A140T8P8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.1■□□□□ 0.49
Trbv17A0A140T8P8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv17A0A140T8P8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv17A0A140T8P8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Trbv17A0A140T8P8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv17A0A140T8P8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv17A0A140T8P8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv17A0A140T8P8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv17A0A140T8P8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv17A0A140T8P8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv17A0A140T8P8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv17A0A140T8P8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv17A0A140T8P8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv17A0A140T8P8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv17A0A140T8P8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv17A0A140T8P8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Trbv17A0A140T8P8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv17A0A140T8P8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.06■□□□□ 0.48
Trbv17A0A140T8P8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv17A0A140T8P8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv17A0A140T8P8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv17A0A140T8P8 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.04■□□□□ 0.48
Trbv17A0A140T8P8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv17A0A140T8P8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Trbv17A0A140T8P8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Trbv17A0A140T8P8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trbv17A0A140T8P8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv17A0A140T8P8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv17A0A140T8P8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv17A0A140T8P8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trbv17A0A140T8P8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Trbv17A0A140T8P8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trbv17A0A140T8P8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.02■□□□□ 0.48
Trbv17A0A140T8P8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.02■□□□□ 0.48
Trbv17A0A140T8P8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trbv17A0A140T8P8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv17A0A140T8P8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv17A0A140T8P8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv17A0A140T8P8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv17A0A140T8P8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv17A0A140T8P8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv17A0A140T8P8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18■□□□□ 0.47
Trbv17A0A140T8P8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trbv17A0A140T8P8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trbv17A0A140T8P8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv17A0A140T8P8 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.99■□□□□ 0.47
Trbv17A0A140T8P8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv17A0A140T8P8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv17A0A140T8P8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trbv17A0A140T8P8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv17A0A140T8P8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv17A0A140T8P8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv17A0A140T8P8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv17A0A140T8P8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv17A0A140T8P8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv17A0A140T8P8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trbv17A0A140T8P8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.95■□□□□ 0.46
Trbv17A0A140T8P8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv17A0A140T8P8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv17A0A140T8P8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv17A0A140T8P8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv17A0A140T8P8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv17A0A140T8P8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv17A0A140T8P8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trbv17A0A140T8P8 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.92■□□□□ 0.46
Trbv17A0A140T8P8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv17A0A140T8P8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.91■□□□□ 0.46
Trbv17A0A140T8P8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv17A0A140T8P8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms