Protein–RNA interactions for Protein: A0A140T8L3

Rpl7a-ps5, Ribosomal protein L7A, pseudogene 5, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl7a-ps5A0A140T8L3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl7a-ps5A0A140T8L3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rpl7a-ps5A0A140T8L3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl7a-ps5A0A140T8L3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.71■□□□□ 0.91
Rpl7a-ps5A0A140T8L3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rpl7a-ps5A0A140T8L3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rpl7a-ps5A0A140T8L3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.7■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.69■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.68■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.66■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rpl7a-ps5A0A140T8L3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.62■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Gm16148-201ENSMUST00000119653 893 ntBASIC20.61■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Zfp131-205ENSMUST00000223812 663 ntBASIC20.61■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpl7a-ps5A0A140T8L3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Peli2-204ENSMUST00000226513 1320 ntBASIC20.54■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.54■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpl7a-ps5A0A140T8L3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.51■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpl7a-ps5A0A140T8L3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.45■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpl7a-ps5A0A140T8L3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms