Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv26A0A0B4J1P5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv26A0A0B4J1P5 Gm6821-201ENSMUST00000107540 542 ntBASIC19.86■□□□□ 0.77
Trbv26A0A0B4J1P5 Nkain2-201ENSMUST00000092602 558 ntBASIC19.86■□□□□ 0.77
Trbv26A0A0B4J1P5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv26A0A0B4J1P5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trbv26A0A0B4J1P5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trbv26A0A0B4J1P5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.85■□□□□ 0.77
Trbv26A0A0B4J1P5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
Trbv26A0A0B4J1P5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv26A0A0B4J1P5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv26A0A0B4J1P5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv26A0A0B4J1P5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Trbv26A0A0B4J1P5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv26A0A0B4J1P5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Trbv26A0A0B4J1P5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv26A0A0B4J1P5 Amer2-203ENSMUST00000225247 2662 ntBASIC19.8■□□□□ 0.76
Trbv26A0A0B4J1P5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv26A0A0B4J1P5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv26A0A0B4J1P5 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.8■□□□□ 0.76
Trbv26A0A0B4J1P5 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.8■□□□□ 0.76
Trbv26A0A0B4J1P5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv26A0A0B4J1P5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.79■□□□□ 0.76
Trbv26A0A0B4J1P5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Trbv26A0A0B4J1P5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv26A0A0B4J1P5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv26A0A0B4J1P5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trbv26A0A0B4J1P5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.78■□□□□ 0.76
Trbv26A0A0B4J1P5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.78■□□□□ 0.76
Trbv26A0A0B4J1P5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Trbv26A0A0B4J1P5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trbv26A0A0B4J1P5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Trbv26A0A0B4J1P5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.75■□□□□ 0.75
Trbv26A0A0B4J1P5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv26A0A0B4J1P5 Gm8503-201ENSMUST00000118131 455 ntBASIC19.74■□□□□ 0.75
Trbv26A0A0B4J1P5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
Trbv26A0A0B4J1P5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trbv26A0A0B4J1P5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv26A0A0B4J1P5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.71■□□□□ 0.75
Trbv26A0A0B4J1P5 Gm30023-201ENSMUST00000197970 889 ntBASIC19.7■□□□□ 0.74
Trbv26A0A0B4J1P5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv26A0A0B4J1P5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trbv26A0A0B4J1P5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv26A0A0B4J1P5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv26A0A0B4J1P5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv26A0A0B4J1P5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.69■□□□□ 0.74
Trbv26A0A0B4J1P5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv26A0A0B4J1P5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv26A0A0B4J1P5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trbv26A0A0B4J1P5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv26A0A0B4J1P5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.68■□□□□ 0.74
Trbv26A0A0B4J1P5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.68■□□□□ 0.74
Trbv26A0A0B4J1P5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.68■□□□□ 0.74
Trbv26A0A0B4J1P5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.68■□□□□ 0.74
Trbv26A0A0B4J1P5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv26A0A0B4J1P5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.68■□□□□ 0.74
Trbv26A0A0B4J1P5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv26A0A0B4J1P5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.67■□□□□ 0.74
Trbv26A0A0B4J1P5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv26A0A0B4J1P5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv26A0A0B4J1P5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv26A0A0B4J1P5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv26A0A0B4J1P5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.65■□□□□ 0.74
Trbv26A0A0B4J1P5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv26A0A0B4J1P5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv26A0A0B4J1P5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trbv26A0A0B4J1P5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trbv26A0A0B4J1P5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv26A0A0B4J1P5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv26A0A0B4J1P5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv26A0A0B4J1P5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv26A0A0B4J1P5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv26A0A0B4J1P5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv26A0A0B4J1P5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.63■□□□□ 0.73
Trbv26A0A0B4J1P5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.62■□□□□ 0.73
Trbv26A0A0B4J1P5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv26A0A0B4J1P5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv26A0A0B4J1P5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv26A0A0B4J1P5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trbv26A0A0B4J1P5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trbv26A0A0B4J1P5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.61■□□□□ 0.73
Trbv26A0A0B4J1P5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trbv26A0A0B4J1P5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.59■□□□□ 0.73
Trbv26A0A0B4J1P5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv26A0A0B4J1P5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Trbv26A0A0B4J1P5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Trbv26A0A0B4J1P5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trbv26A0A0B4J1P5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv26A0A0B4J1P5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv26A0A0B4J1P5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv26A0A0B4J1P5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv26A0A0B4J1P5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.56■□□□□ 0.72
Trbv26A0A0B4J1P5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trbv26A0A0B4J1P5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trbv26A0A0B4J1P5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv26A0A0B4J1P5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trbv26A0A0B4J1P5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv26A0A0B4J1P5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv26A0A0B4J1P5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv26A0A0B4J1P5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms