Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv15A0A0A6YYE3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv15A0A0A6YYE3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trbv15A0A0A6YYE3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trbv15A0A0A6YYE3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbv15A0A0A6YYE3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trbv15A0A0A6YYE3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv15A0A0A6YYE3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv15A0A0A6YYE3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv15A0A0A6YYE3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trbv15A0A0A6YYE3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv15A0A0A6YYE3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv15A0A0A6YYE3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trbv15A0A0A6YYE3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv15A0A0A6YYE3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv15A0A0A6YYE3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.87■□□□□ 0.77
Trbv15A0A0A6YYE3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv15A0A0A6YYE3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv15A0A0A6YYE3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv15A0A0A6YYE3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv15A0A0A6YYE3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv15A0A0A6YYE3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trbv15A0A0A6YYE3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trbv15A0A0A6YYE3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv15A0A0A6YYE3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv15A0A0A6YYE3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv15A0A0A6YYE3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trbv15A0A0A6YYE3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv15A0A0A6YYE3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.83■□□□□ 0.77
Trbv15A0A0A6YYE3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trbv15A0A0A6YYE3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv15A0A0A6YYE3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv15A0A0A6YYE3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trbv15A0A0A6YYE3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv15A0A0A6YYE3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv15A0A0A6YYE3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trbv15A0A0A6YYE3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.82■□□□□ 0.76
Trbv15A0A0A6YYE3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv15A0A0A6YYE3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv15A0A0A6YYE3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv15A0A0A6YYE3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv15A0A0A6YYE3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv15A0A0A6YYE3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv15A0A0A6YYE3 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.8■□□□□ 0.76
Trbv15A0A0A6YYE3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv15A0A0A6YYE3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Trbv15A0A0A6YYE3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv15A0A0A6YYE3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv15A0A0A6YYE3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trbv15A0A0A6YYE3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv15A0A0A6YYE3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trbv15A0A0A6YYE3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv15A0A0A6YYE3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv15A0A0A6YYE3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv15A0A0A6YYE3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv15A0A0A6YYE3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv15A0A0A6YYE3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv15A0A0A6YYE3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trbv15A0A0A6YYE3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv15A0A0A6YYE3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trbv15A0A0A6YYE3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv15A0A0A6YYE3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv15A0A0A6YYE3 Gm26115-201ENSMUST00000175605 87 ntBASIC19.72■□□□□ 0.75
Trbv15A0A0A6YYE3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trbv15A0A0A6YYE3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trbv15A0A0A6YYE3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trbv15A0A0A6YYE3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trbv15A0A0A6YYE3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv15A0A0A6YYE3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trbv15A0A0A6YYE3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv15A0A0A6YYE3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv15A0A0A6YYE3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.68■□□□□ 0.74
Trbv15A0A0A6YYE3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv15A0A0A6YYE3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv15A0A0A6YYE3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.67■□□□□ 0.74
Trbv15A0A0A6YYE3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv15A0A0A6YYE3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv15A0A0A6YYE3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv15A0A0A6YYE3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv15A0A0A6YYE3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trbv15A0A0A6YYE3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trbv15A0A0A6YYE3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv15A0A0A6YYE3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv15A0A0A6YYE3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv15A0A0A6YYE3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trbv15A0A0A6YYE3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv15A0A0A6YYE3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trbv15A0A0A6YYE3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Trbv15A0A0A6YYE3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trbv15A0A0A6YYE3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trbv15A0A0A6YYE3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trbv15A0A0A6YYE3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.63■□□□□ 0.73
Trbv15A0A0A6YYE3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv15A0A0A6YYE3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv15A0A0A6YYE3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Trbv15A0A0A6YYE3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv15A0A0A6YYE3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trbv15A0A0A6YYE3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv15A0A0A6YYE3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv15A0A0A6YYE3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms