Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav3-4A0A075B654 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav3-4A0A075B654 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav3-4A0A075B654 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav3-4A0A075B654 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav3-4A0A075B654 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav3-4A0A075B654 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav3-4A0A075B654 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav3-4A0A075B654 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav3-4A0A075B654 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav3-4A0A075B654 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
Trav3-4A0A075B654 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav3-4A0A075B654 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav3-4A0A075B654 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav3-4A0A075B654 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav3-4A0A075B654 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav3-4A0A075B654 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav3-4A0A075B654 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav3-4A0A075B654 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav3-4A0A075B654 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav3-4A0A075B654 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Trav3-4A0A075B654 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav3-4A0A075B654 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav3-4A0A075B654 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav3-4A0A075B654 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav3-4A0A075B654 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav3-4A0A075B654 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav3-4A0A075B654 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav3-4A0A075B654 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav3-4A0A075B654 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav3-4A0A075B654 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav3-4A0A075B654 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav3-4A0A075B654 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav3-4A0A075B654 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav3-4A0A075B654 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav3-4A0A075B654 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav3-4A0A075B654 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav3-4A0A075B654 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav3-4A0A075B654 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav3-4A0A075B654 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav3-4A0A075B654 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Trav3-4A0A075B654 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav3-4A0A075B654 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav3-4A0A075B654 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav3-4A0A075B654 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav3-4A0A075B654 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav3-4A0A075B654 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav3-4A0A075B654 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav3-4A0A075B654 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav3-4A0A075B654 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav3-4A0A075B654 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav3-4A0A075B654 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav3-4A0A075B654 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav3-4A0A075B654 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trav3-4A0A075B654 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav3-4A0A075B654 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav3-4A0A075B654 AL845457.1-201ENSMUST00000197244 68 ntBASIC15.84■□□□□ 0.13
Trav3-4A0A075B654 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Trav3-4A0A075B654 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Trav3-4A0A075B654 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav3-4A0A075B654 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav3-4A0A075B654 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3-4A0A075B654 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3-4A0A075B654 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav3-4A0A075B654 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3-4A0A075B654 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav3-4A0A075B654 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3-4A0A075B654 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3-4A0A075B654 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3-4A0A075B654 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC15.82■□□□□ 0.12
Trav3-4A0A075B654 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav3-4A0A075B654 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav3-4A0A075B654 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav3-4A0A075B654 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav3-4A0A075B654 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav3-4A0A075B654 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav3-4A0A075B654 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav3-4A0A075B654 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav3-4A0A075B654 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav3-4A0A075B654 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav3-4A0A075B654 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav3-4A0A075B654 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav3-4A0A075B654 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav3-4A0A075B654 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav3-4A0A075B654 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav3-4A0A075B654 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Trav3-4A0A075B654 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav3-4A0A075B654 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav3-4A0A075B654 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trav3-4A0A075B654 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.79■□□□□ 0.12
Trav3-4A0A075B654 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav3-4A0A075B654 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav3-4A0A075B654 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav3-4A0A075B654 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav3-4A0A075B654 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav3-4A0A075B654 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav3-4A0A075B654 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav3-4A0A075B654 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav3-4A0A075B654 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav3-4A0A075B654 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms