Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Trav7n-4A0A075B620 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7n-4A0A075B620 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.05■□□□□ 0.48
Trav7n-4A0A075B620 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7n-4A0A075B620 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7n-4A0A075B620 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav7n-4A0A075B620 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trav7n-4A0A075B620 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7n-4A0A075B620 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7n-4A0A075B620 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7n-4A0A075B620 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7n-4A0A075B620 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7n-4A0A075B620 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7n-4A0A075B620 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7n-4A0A075B620 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav7n-4A0A075B620 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7n-4A0A075B620 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trav7n-4A0A075B620 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7n-4A0A075B620 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav7n-4A0A075B620 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav7n-4A0A075B620 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav7n-4A0A075B620 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-4A0A075B620 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-4A0A075B620 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-4A0A075B620 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Trav7n-4A0A075B620 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-4A0A075B620 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-4A0A075B620 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trav7n-4A0A075B620 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trav7n-4A0A075B620 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-4A0A075B620 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav7n-4A0A075B620 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.98■□□□□ 0.47
Trav7n-4A0A075B620 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.98■□□□□ 0.47
Trav7n-4A0A075B620 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trav7n-4A0A075B620 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7n-4A0A075B620 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav7n-4A0A075B620 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7n-4A0A075B620 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trav7n-4A0A075B620 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav7n-4A0A075B620 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trav7n-4A0A075B620 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7n-4A0A075B620 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7n-4A0A075B620 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav7n-4A0A075B620 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7n-4A0A075B620 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7n-4A0A075B620 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Trav7n-4A0A075B620 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav7n-4A0A075B620 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7n-4A0A075B620 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav7n-4A0A075B620 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Trav7n-4A0A075B620 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7n-4A0A075B620 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7n-4A0A075B620 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav7n-4A0A075B620 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7n-4A0A075B620 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav7n-4A0A075B620 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7n-4A0A075B620 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7n-4A0A075B620 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav7n-4A0A075B620 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7n-4A0A075B620 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7n-4A0A075B620 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7n-4A0A075B620 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7n-4A0A075B620 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7n-4A0A075B620 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav7n-4A0A075B620 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trav7n-4A0A075B620 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Trav7n-4A0A075B620 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav7n-4A0A075B620 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7n-4A0A075B620 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7n-4A0A075B620 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7n-4A0A075B620 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav7n-4A0A075B620 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7n-4A0A075B620 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7n-4A0A075B620 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Trav7n-4A0A075B620 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trav7n-4A0A075B620 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trav7n-4A0A075B620 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav7n-4A0A075B620 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7n-4A0A075B620 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7n-4A0A075B620 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7n-4A0A075B620 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7n-4A0A075B620 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7n-4A0A075B620 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7n-4A0A075B620 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7n-4A0A075B620 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7n-4A0A075B620 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7n-4A0A075B620 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav7n-4A0A075B620 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav7n-4A0A075B620 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7n-4A0A075B620 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav7n-4A0A075B620 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trav7n-4A0A075B620 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-4A0A075B620 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-4A0A075B620 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-4A0A075B620 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-4A0A075B620 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7n-4A0A075B620 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7n-4A0A075B620 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7n-4A0A075B620 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7n-4A0A075B620 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms