Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Col18a1P39061 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Col18a1P39061 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.15□□□□□ -1.58
Col18a1P39061 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col18a1P39061 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Col18a1P39061 Gm23697-201ENSMUST00000103897 110 ntBASIC5.15□□□□□ -1.58
Col18a1P39061 Gm12543-201ENSMUST00000120410 543 ntBASIC5.15□□□□□ -1.58
Col18a1P39061 Gm26349-201ENSMUST00000157530 130 ntBASIC5.15□□□□□ -1.58
Col18a1P39061 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col18a1P39061 Gm27585-201ENSMUST00000183717 199 ntBASIC5.15□□□□□ -1.58
Col18a1P39061 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Col18a1P39061 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.15□□□□□ -1.58
Col18a1P39061 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Col18a1P39061 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.15□□□□□ -1.59
Col18a1P39061 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
Col18a1P39061 Gm44433-201ENSMUST00000203540 4832 ntBASIC5.15□□□□□ -1.59
Col18a1P39061 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col18a1P39061 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Col18a1P39061 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Col18a1P39061 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col18a1P39061 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
Col18a1P39061 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col18a1P39061 Gm11221-201ENSMUST00000117230 597 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm14861-201ENSMUST00000119451 455 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm11704-201ENSMUST00000120031 214 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col18a1P39061 Gm25519-201ENSMUST00000158392 127 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm23581-201ENSMUST00000158531 63 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm17538-201ENSMUST00000168236 327 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Col18a1P39061 Gm7958-201ENSMUST00000178255 468 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm7950-201ENSMUST00000179633 468 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm29134-201ENSMUST00000186579 126 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm28241-201ENSMUST00000190916 235 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Olfr1285-201ENSMUST00000208523 903 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 AC107864.1-201ENSMUST00000217937 496 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col18a1P39061 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col18a1P39061 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col18a1P39061 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col18a1P39061 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
Col18a1P39061 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col18a1P39061 Gm44049-201ENSMUST00000204905 2984 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col18a1P39061 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
Col18a1P39061 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Col18a1P39061 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col18a1P39061 Gm7164-201ENSMUST00000117503 450 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm15215-201ENSMUST00000117773 489 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm6274-201ENSMUST00000118173 797 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm12686-201ENSMUST00000120546 397 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm13677-201ENSMUST00000120739 595 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm26088-201ENSMUST00000157896 131 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col18a1P39061 Gm27428-201ENSMUST00000184289 110 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.14□□□□□ -1.59
Col18a1P39061 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm43529-201ENSMUST00000199178 412 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.14□□□□□ -1.59
Col18a1P39061 Gm19181-201ENSMUST00000218891 940 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.14□□□□□ -1.59
Col18a1P39061 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col18a1P39061 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col18a1P39061 Gm2710-201ENSMUST00000073196 603 ntBASIC5.14□□□□□ -1.59
Col18a1P39061 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col18a1P39061 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col18a1P39061 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.13□□□□□ -1.59
Col18a1P39061 Gm16005-201ENSMUST00000120515 269 ntBASIC5.13□□□□□ -1.59
Col18a1P39061 Gm15786-201ENSMUST00000121079 450 ntBASIC5.13□□□□□ -1.59
Col18a1P39061 Gm12872-201ENSMUST00000121835 320 ntBASIC5.13□□□□□ -1.59
Col18a1P39061 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC5.13□□□□□ -1.59
Col18a1P39061 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col18a1P39061 Gm20162-201ENSMUST00000193629 871 ntBASIC5.13□□□□□ -1.59
Col18a1P39061 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col18a1P39061 n-TSaga9-201ENSMUST00000197675 107 ntBASIC5.13□□□□□ -1.59
Col18a1P39061 Gm43368-201ENSMUST00000200638 409 ntBASIC5.13□□□□□ -1.59
Col18a1P39061 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col18a1P39061 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col18a1P39061 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Col18a1P39061 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Col18a1P39061 AC170600.1-201ENSMUST00000228763 277 ntBASIC5.13□□□□□ -1.59
Col18a1P39061 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col18a1P39061 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col18a1P39061 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Col18a1P39061 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col18a1P39061 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col18a1P39061 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col18a1P39061 Gm13311-201ENSMUST00000117863 379 ntBASIC5.12□□□□□ -1.59
Col18a1P39061 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.12□□□□□ -1.59
Col18a1P39061 Gm14128-201ENSMUST00000119514 1011 ntBASIC5.12□□□□□ -1.59
Col18a1P39061 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC5.12□□□□□ -1.59
Col18a1P39061 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col18a1P39061 Gm27044-201ENSMUST00000183033 796 ntBASIC5.12□□□□□ -1.59
Col18a1P39061 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
Col18a1P39061 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC5.12□□□□□ -1.59
Col18a1P39061 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col18a1P39061 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Col18a1P39061 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 167.5 ms