Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col18a1P39061 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col18a1P39061 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col18a1P39061 Gm37792-201ENSMUST00000195761 3413 ntBASIC5.28□□□□□ -1.56
Col18a1P39061 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col18a1P39061 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col18a1P39061 Gm20399-201ENSMUST00000174652 132 ntBASIC5.28□□□□□ -1.56
Col18a1P39061 Mir7k-201ENSMUST00000184115 110 ntBASIC5.28□□□□□ -1.56
Col18a1P39061 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col18a1P39061 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.28□□□□□ -1.56
Col18a1P39061 Gm45063-201ENSMUST00000203726 472 ntBASIC5.28□□□□□ -1.56
Col18a1P39061 Gm18194-201ENSMUST00000210455 481 ntBASIC5.28□□□□□ -1.56
Col18a1P39061 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC5.28□□□□□ -1.56
Col18a1P39061 AC159885.1-201ENSMUST00000222221 199 ntBASIC5.28□□□□□ -1.56
Col18a1P39061 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.28□□□□□ -1.56
Col18a1P39061 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Col18a1P39061 Gm15102-201ENSMUST00000118740 1502 ntBASIC5.28□□□□□ -1.56
Col18a1P39061 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col18a1P39061 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col18a1P39061 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col18a1P39061 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col18a1P39061 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
Col18a1P39061 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col18a1P39061 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col18a1P39061 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Col18a1P39061 Gm37124-201ENSMUST00000192140 1992 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Gm15211-201ENSMUST00000118932 528 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Gm14240-201ENSMUST00000120353 546 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Gm12005-201ENSMUST00000121451 379 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Gm12815-201ENSMUST00000121737 135 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col18a1P39061 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col18a1P39061 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
Col18a1P39061 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
Col18a1P39061 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Col18a1P39061 Mir6938-201ENSMUST00000184173 63 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC5.27□□□□□ -1.57
Col18a1P39061 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC5.27□□□□□ -1.57
Col18a1P39061 Mir30e-201ENSMUST00000083475 92 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col18a1P39061 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Col18a1P39061 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Col18a1P39061 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
Col18a1P39061 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col18a1P39061 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col18a1P39061 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col18a1P39061 Gm37176-201ENSMUST00000193300 4051 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col18a1P39061 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
Col18a1P39061 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col18a1P39061 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col18a1P39061 Gm25539-201ENSMUST00000116886 122 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Gm9836-201ENSMUST00000117132 216 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Gm12683-201ENSMUST00000117528 415 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Gm15019-201ENSMUST00000120148 434 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC5.27□□□□□ -1.57
Col18a1P39061 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Gm44858-201ENSMUST00000207360 154 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC5.27□□□□□ -1.57
Col18a1P39061 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col18a1P39061 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col18a1P39061 Gm24626-201ENSMUST00000082621 161 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Mir421-201ENSMUST00000083575 76 ntBASIC5.27□□□□□ -1.57
Col18a1P39061 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col18a1P39061 Gm44860-201ENSMUST00000208473 2346 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col18a1P39061 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col18a1P39061 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Col18a1P39061 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col18a1P39061 Gm43881-201ENSMUST00000203051 2530 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col18a1P39061 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col18a1P39061 Gm24118-201ENSMUST00000103972 126 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Gm25915-201ENSMUST00000104265 126 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Gm12571-201ENSMUST00000118132 243 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Gm15377-201ENSMUST00000119594 246 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Gm25290-201ENSMUST00000122796 144 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Gm25898-201ENSMUST00000158303 106 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Gm27342-201ENSMUST00000183530 109 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Gm27928-201ENSMUST00000183747 256 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Gm42475-201ENSMUST00000201212 295 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Gm44063-201ENSMUST00000203307 376 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC5.26□□□□□ -1.57
Col18a1P39061 Gm45474-201ENSMUST00000209471 408 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 AC138667.2-201ENSMUST00000224880 598 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col18a1P39061 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col18a1P39061 Gm25630-201ENSMUST00000084000 162 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Gm3867-201ENSMUST00000086108 279 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
Col18a1P39061 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.26□□□□□ -1.57
Col18a1P39061 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
Col18a1P39061 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col18a1P39061 Gm43751-201ENSMUST00000200275 3071 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.26□□□□□ -1.57
Col18a1P39061 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Col18a1P39061 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 142.1 ms