Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.59■□□□□ 0.41
Thumpd3P97770 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.59■□□□□ 0.41
Thumpd3P97770 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Thumpd3P97770 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.58■□□□□ 0.41
Thumpd3P97770 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Thumpd3P97770 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Thumpd3P97770 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Thumpd3P97770 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd3P97770 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd3P97770 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.58■□□□□ 0.4
Thumpd3P97770 Gm2559-201ENSMUST00000201323 363 ntBASIC17.58■□□□□ 0.4
Thumpd3P97770 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd3P97770 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd3P97770 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd3P97770 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd3P97770 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd3P97770 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd3P97770 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd3P97770 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd3P97770 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd3P97770 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Thumpd3P97770 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd3P97770 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd3P97770 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd3P97770 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd3P97770 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Thumpd3P97770 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Thumpd3P97770 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd3P97770 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd3P97770 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.57■□□□□ 0.4
Thumpd3P97770 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Thumpd3P97770 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd3P97770 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd3P97770 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd3P97770 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Thumpd3P97770 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd3P97770 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd3P97770 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd3P97770 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd3P97770 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd3P97770 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.56■□□□□ 0.4
Thumpd3P97770 Gm10252-201ENSMUST00000209541 832 ntBASIC17.56■□□□□ 0.4
Thumpd3P97770 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd3P97770 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd3P97770 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd3P97770 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Thumpd3P97770 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Thumpd3P97770 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.55■□□□□ 0.4
Thumpd3P97770 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Thumpd3P97770 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.55■□□□□ 0.4
Thumpd3P97770 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.55■□□□□ 0.4
Thumpd3P97770 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.55■□□□□ 0.4
Thumpd3P97770 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.55■□□□□ 0.4
Thumpd3P97770 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Thumpd3P97770 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Thumpd3P97770 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Thumpd3P97770 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Thumpd3P97770 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.54■□□□□ 0.4
Thumpd3P97770 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd3P97770 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd3P97770 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Thumpd3P97770 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd3P97770 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.54■□□□□ 0.4
Thumpd3P97770 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd3P97770 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd3P97770 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.54■□□□□ 0.4
Thumpd3P97770 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd3P97770 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Thumpd3P97770 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd3P97770 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd3P97770 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.53■□□□□ 0.4
Thumpd3P97770 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.53■□□□□ 0.4
Thumpd3P97770 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd3P97770 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd3P97770 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd3P97770 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd3P97770 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd3P97770 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd3P97770 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Thumpd3P97770 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms