Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PrkdcP97313 Gm14416-201ENSMUST00000118630 2308 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Gm36962-201ENSMUST00000192114 1761 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PrkdcP97313 Trav20-201ENSMUST00000142754 347 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PrkdcP97313 Gm18984-201ENSMUST00000193998 1124 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PrkdcP97313 Gm43596-201ENSMUST00000202818 884 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC1.8□□□□□ -2.12
PrkdcP97313 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC1.8□□□□□ -2.12
PrkdcP97313 Olfr844-201ENSMUST00000054106 930 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PrkdcP97313 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PrkdcP97313 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
PrkdcP97313 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PrkdcP97313 Gm43466-201ENSMUST00000197836 5214 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
PrkdcP97313 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
PrkdcP97313 Gm15074-201ENSMUST00000117603 936 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Gm9850-201ENSMUST00000117916 227 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Gm14578-201ENSMUST00000122166 391 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
PrkdcP97313 Gm43722-201ENSMUST00000196054 124 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC1.8□□□□□ -2.12
PrkdcP97313 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PrkdcP97313 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PrkdcP97313 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
PrkdcP97313 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
PrkdcP97313 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PrkdcP97313 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PrkdcP97313 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
PrkdcP97313 Gm14848-201ENSMUST00000121850 467 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Gm38166-201ENSMUST00000191660 471 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC1.8□□□□□ -2.12
PrkdcP97313 Gm8902-201ENSMUST00000174341 1096 ntBASIC1.79□□□□□ -2.12
PrkdcP97313 Gm17890-201ENSMUST00000221419 757 ntBASIC1.79□□□□□ -2.12
PrkdcP97313 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PrkdcP97313 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PrkdcP97313 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PrkdcP97313 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PrkdcP97313 Gm24664-201ENSMUST00000158939 100 ntBASIC1.79□□□□□ -2.12
PrkdcP97313 Gm18448-201ENSMUST00000186286 599 ntBASIC1.79□□□□□ -2.12
PrkdcP97313 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PrkdcP97313 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC1.79□□□□□ -2.12
PrkdcP97313 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PrkdcP97313 Gm7530-201ENSMUST00000218466 605 ntBASIC1.79□□□□□ -2.12
PrkdcP97313 AC127578.1-201ENSMUST00000227289 93 ntBASIC1.79□□□□□ -2.12
PrkdcP97313 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PrkdcP97313 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
PrkdcP97313 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC1.79□□□□□ -2.12
PrkdcP97313 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PrkdcP97313 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PrkdcP97313 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PrkdcP97313 Neat1-201ENSMUST00000173672 20771 ntBASIC1.79□□□□□ -2.12
PrkdcP97313 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PrkdcP97313 Gm6797-201ENSMUST00000119440 512 ntBASIC1.79□□□□□ -2.12
PrkdcP97313 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.79□□□□□ -2.12
PrkdcP97313 Ang-ps3-201ENSMUST00000177964 433 ntBASIC1.79□□□□□ -2.12
PrkdcP97313 Gm24638-201ENSMUST00000179807 132 ntBASIC1.79□□□□□ -2.12
PrkdcP97313 Gm43601-201ENSMUST00000196294 945 ntBASIC1.79□□□□□ -2.12
PrkdcP97313 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PrkdcP97313 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
PrkdcP97313 Gm22713-201ENSMUST00000116895 130 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Gm14768-201ENSMUST00000122126 678 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Gm23043-201ENSMUST00000157890 109 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Gm29657-201ENSMUST00000189807 342 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Gm19224-201ENSMUST00000190477 793 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC1.78□□□□□ -2.12
PrkdcP97313 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC1.78□□□□□ -2.12
PrkdcP97313 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PrkdcP97313 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC1.78□□□□□ -2.12
PrkdcP97313 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
PrkdcP97313 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.78□□□□□ -2.12
PrkdcP97313 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PrkdcP97313 AC140397.1-201ENSMUST00000225563 4562 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
PrkdcP97313 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
PrkdcP97313 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC1.78□□□□□ -2.12
PrkdcP97313 Gm45735-201ENSMUST00000212779 319 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 AC126554.4-201ENSMUST00000221055 409 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Gm18026-201ENSMUST00000222789 727 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PrkdcP97313 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
PrkdcP97313 Gm14880-201ENSMUST00000117581 292 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Gm13432-201ENSMUST00000118861 241 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Gm25902-201ENSMUST00000158493 318 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Gm28637-201ENSMUST00000179424 345 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Gm28623-201ENSMUST00000187219 192 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 Gm45814-201ENSMUST00000212646 775 ntBASIC1.78□□□□□ -2.12
PrkdcP97313 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC1.78□□□□□ -2.12
PrkdcP97313 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.78□□□□□ -2.12
PrkdcP97313 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC1.78□□□□□ -2.13
PrkdcP97313 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC1.78□□□□□ -2.13
PrkdcP97313 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PrkdcP97313 Gm13314-201ENSMUST00000118742 335 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC1.77□□□□□ -2.13
PrkdcP97313 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 132.2 ms