Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm43922-201ENSMUST00000205071 328 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 AC164424.1-201ENSMUST00000221690 170 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Gm10356-201ENSMUST00000097152 1258 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
Col18a1P39061 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col18a1P39061 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Col18a1P39061 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col18a1P39061 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col18a1P39061 AC152162.1-201ENSMUST00000225910 2917 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col18a1P39061 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.42□□□□□ -1.54
Col18a1P39061 Gm43715-201ENSMUST00000196307 2715 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col18a1P39061 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.42□□□□□ -1.54
Col18a1P39061 Gm25436-201ENSMUST00000158275 145 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm23205-201ENSMUST00000158671 103 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm29534-201ENSMUST00000187328 382 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm28299-201ENSMUST00000189908 339 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 AC132437.1-201ENSMUST00000218308 320 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.42□□□□□ -1.54
Col18a1P39061 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col18a1P39061 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col18a1P39061 Olfr895-201ENSMUST00000093864 951 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col18a1P39061 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col18a1P39061 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col18a1P39061 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col18a1P39061 Gm43829-201ENSMUST00000196191 3802 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Col18a1P39061 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Col18a1P39061 Gm15553-201ENSMUST00000118757 430 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Gm15141-201ENSMUST00000121860 729 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Gm23229-201ENSMUST00000157297 105 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Gm8207-201ENSMUST00000171204 502 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col18a1P39061 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col18a1P39061 Gm28191-201ENSMUST00000189112 211 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Gm29262-201ENSMUST00000190084 196 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col18a1P39061 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC5.41□□□□□ -1.54
Col18a1P39061 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Col18a1P39061 Gm45409-201ENSMUST00000211486 252 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Gm45860-201ENSMUST00000212700 334 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Col18a1P39061 CT010511.1-201ENSMUST00000224570 315 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col18a1P39061 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Col18a1P39061 Gm23297-201ENSMUST00000083184 127 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC5.41□□□□□ -1.54
Col18a1P39061 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.41□□□□□ -1.54
Col18a1P39061 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col18a1P39061 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col18a1P39061 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col18a1P39061 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Col18a1P39061 Gm336-201ENSMUST00000186376 1480 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col18a1P39061 Gm26146-201ENSMUST00000104478 185 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm14125-201ENSMUST00000113442 680 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm14731-201ENSMUST00000119216 376 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm23214-201ENSMUST00000122716 157 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm24901-201ENSMUST00000158125 110 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm23824-201ENSMUST00000158741 276 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm3470-201ENSMUST00000160819 420 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm7870-201ENSMUST00000184467 616 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Mir6914-201ENSMUST00000184999 69 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm28591-201ENSMUST00000185259 183 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm19503-201ENSMUST00000187109 241 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm43308-201ENSMUST00000197236 373 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Gm44543-201ENSMUST00000209136 396 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.4□□□□□ -1.54
Col18a1P39061 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Col18a1P39061 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Col18a1P39061 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col18a1P39061 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Col18a1P39061 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Col18a1P39061 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC5.4□□□□□ -1.55
Col18a1P39061 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
Col18a1P39061 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Col18a1P39061 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 211.6 ms