Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm43355-201ENSMUST00000196541 346 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC5.44□□□□□ -1.54
Col18a1P39061 Gm6240-201ENSMUST00000208014 473 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 AC160114.1-201ENSMUST00000221930 365 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col18a1P39061 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col18a1P39061 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col18a1P39061 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col18a1P39061 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 Gm38388-201ENSMUST00000195569 1430 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Gm44120-201ENSMUST00000203022 3023 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Col18a1P39061 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col18a1P39061 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 Gm37478-201ENSMUST00000193624 3495 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 Gm37412-201ENSMUST00000194866 4321 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Gm12125-201ENSMUST00000117261 736 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Gm14761-201ENSMUST00000121363 262 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.44□□□□□ -1.54
Col18a1P39061 Gm23755-201ENSMUST00000157578 343 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.44□□□□□ -1.54
Col18a1P39061 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Gm22851-201ENSMUST00000178741 94 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Gm27828-201ENSMUST00000184108 119 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 Gm2719-201ENSMUST00000191929 444 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5.44□□□□□ -1.54
Col18a1P39061 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 Gm44355-201ENSMUST00000200417 104 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Gm44261-201ENSMUST00000203337 209 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC5.44□□□□□ -1.54
Col18a1P39061 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col18a1P39061 Gm23731-201ENSMUST00000083749 107 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Gm22154-201ENSMUST00000083844 131 ntBASIC5.44□□□□□ -1.54
Col18a1P39061 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col18a1P39061 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col18a1P39061 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.44□□□□□ -1.54
Col18a1P39061 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col18a1P39061 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.43□□□□□ -1.54
Col18a1P39061 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col18a1P39061 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Col18a1P39061 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Gm25407-201ENSMUST00000104102 134 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Gm23583-201ENSMUST00000158533 289 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Gm25835-201ENSMUST00000158917 144 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Gm16566-201ENSMUST00000160387 910 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Mir8118-201ENSMUST00000183962 129 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Gm37081-201ENSMUST00000192034 196 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Gm37343-201ENSMUST00000192542 111 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Gm29920-201ENSMUST00000206876 754 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC5.43□□□□□ -1.54
Col18a1P39061 AC125379.1-201ENSMUST00000221928 111 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Col18a1P39061 CT009733.1-201ENSMUST00000225322 425 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 CT030662.3-201ENSMUST00000228751 476 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col18a1P39061 Gm22423-201ENSMUST00000082861 184 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Gm25004-201ENSMUST00000083811 161 ntBASIC5.43□□□□□ -1.54
Col18a1P39061 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col18a1P39061 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col18a1P39061 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Col18a1P39061 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col18a1P39061 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col18a1P39061 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col18a1P39061 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col18a1P39061 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Col18a1P39061 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col18a1P39061 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Gm26002-201ENSMUST00000101915 107 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Mir879-201ENSMUST00000104703 76 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm3940-201ENSMUST00000105087 432 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm14867-201ENSMUST00000120156 866 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm23118-201ENSMUST00000122657 187 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm2343-201ENSMUST00000161177 1042 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col18a1P39061 Gm26556-201ENSMUST00000180645 320 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.42□□□□□ -1.54
Col18a1P39061 Mir6917-201ENSMUST00000184111 61 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm28263-201ENSMUST00000185884 400 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm29104-201ENSMUST00000186304 222 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col18a1P39061 Gm5551-201ENSMUST00000199720 690 ntBASIC5.42□□□□□ -1.54
Col18a1P39061 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 197 ms