Protein–RNA interactions for Protein: Q3E7X9

RPS28A, 40S ribosomal protein S28-A, yeastyeast

Predicted RBP Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS28AQ3E7X9 snR128snR128 126 nt-0.49□□□□□ -2.49
RPS28AQ3E7X9 YFR009W-AYFR009W-A 258 nt-0.5□□□□□ -2.49
RPS28AQ3E7X9 YJL047C-AYJL047C-A 135 nt-0.51□□□□□ -2.49
RPS28AQ3E7X9 YNL319WYNL319W 441 nt-0.51□□□□□ -2.49
RPS28AQ3E7X9 FYV7YLR068W 456 nt-0.52□□□□□ -2.49
RPS28AQ3E7X9 YCR022CYCR022C 345 nt-0.53□□□□□ -2.49
RPS28AQ3E7X9 TAR1YLR154W-C 375 nt-0.53□□□□□ -2.49
RPS28AQ3E7X9 URB1YKL014C 5295 nt-0.54□□□□□ -2.5
RPS28AQ3E7X9 YBL071CYBL071C 309 nt-0.54□□□□□ -2.5
RPS28AQ3E7X9 YOR011W-AYOR011W-A 207 nt-0.54□□□□□ -2.5
RPS28AQ3E7X9 YPL225WYPL225W 441 nt-0.54□□□□□ -2.5
RPS28AQ3E7X9 HMRA2YCR096C 360 nt-0.55□□□□□ -2.5
RPS28AQ3E7X9 YJL007CYJL007C 315 nt-0.55□□□□□ -2.5
RPS28AQ3E7X9 DIE2YGR227W 1578 nt-0.56□□□□□ -2.5
RPS28AQ3E7X9 YCR018C-AYCR018C-A 255 nt-0.56□□□□□ -2.5
RPS28AQ3E7X9 YHL041WYHL041W 450 nt-0.56□□□□□ -2.5
RPS28AQ3E7X9 YIR030W-AYIR030W-A 384 nt-0.56□□□□□ -2.5
RPS28AQ3E7X9 YLL006W-AYLL006W-A 177 nt-0.58□□□□□ -2.5
RPS28AQ3E7X9 YLR269CYLR269C 351 nt-0.58□□□□□ -2.5
RPS28AQ3E7X9 YPR002C-AYPR002C-A 198 nt-0.58□□□□□ -2.5
RPS28AQ3E7X9 PRP39YML046W 1890 nt-0.58□□□□□ -2.5
RPS28AQ3E7X9 ZEO1YOL109W 342 nt-0.59□□□□□ -2.5
RPS28AQ3E7X9 HTB2YBL002W 396 nt-0.6□□□□□ -2.51
RPS28AQ3E7X9 YML007C-AYML007C-A 111 nt-0.6□□□□□ -2.51
RPS28AQ3E7X9 SGF11YPL047W 300 nt-0.6□□□□□ -2.51
RPS28AQ3E7X9 YPR170W-AYPR170W-A 186 nt-0.61□□□□□ -2.51
RPS28AQ3E7X9 CSE1YGL238W 2883 nt-0.62□□□□□ -2.51
RPS28AQ3E7X9 Q0255Q0255 1419 nt-0.62□□□□□ -2.51
RPS28AQ3E7X9 YDL032WYDL032W 312 nt-0.63□□□□□ -2.51
RPS28AQ3E7X9 YKL083WYKL083W 615 nt-0.63□□□□□ -2.51
RPS28AQ3E7X9 YLR287CYLR287C 1068 nt-0.63□□□□□ -2.51
RPS28AQ3E7X9 RPM2YML091C 3609 nt-0.65□□□□□ -2.51
RPS28AQ3E7X9 ECL1YGR146C 636 nt-0.65□□□□□ -2.51
RPS28AQ3E7X9 YJL120WYJL120W 324 nt-0.65□□□□□ -2.51
RPS28AQ3E7X9 YNL303WYNL303W 348 nt-0.65□□□□□ -2.51
RPS28AQ3E7X9 UTP8YGR128C 2142 nt-0.66□□□□□ -2.52
RPS28AQ3E7X9 YHR125WYHR125W 306 nt-0.66□□□□□ -2.52
RPS28AQ3E7X9 RPS25BYLR333C 327 nt-0.67□□□□□ -2.52
RPS28AQ3E7X9 YLR334CYLR334C 381 nt-0.67□□□□□ -2.52
RPS28AQ3E7X9 YPL205CYPL205C 345 nt-0.67□□□□□ -2.52
RPS28AQ3E7X9 YPR092WYPR092W 306 nt-0.68□□□□□ -2.52
RPS28AQ3E7X9 YJL113WYJL113W 4647 nt-0.68□□□□□ -2.52
RPS28AQ3E7X9 YDR426CYDR426C 378 nt-0.69□□□□□ -2.52
RPS28AQ3E7X9 STF2YGR008C 255 nt-0.69□□□□□ -2.52
RPS28AQ3E7X9 tT(UGU)G1tT(UGU)G1 72 nt-0.7□□□□□ -2.52
RPS28AQ3E7X9 tT(UGU)G2tT(UGU)G2 72 nt-0.7□□□□□ -2.52
RPS28AQ3E7X9 tT(UGU)PtT(UGU)P 72 nt-0.7□□□□□ -2.52
RPS28AQ3E7X9 YLR282CYLR282C 342 nt-0.7□□□□□ -2.52
RPS28AQ3E7X9 GPI15YNL038W 690 nt-0.7□□□□□ -2.52
RPS28AQ3E7X9 YNL067W-BYNL067W-B 141 nt-0.7□□□□□ -2.52
RPS28AQ3E7X9 YLR285C-AYLR285C-A 171 nt-0.71□□□□□ -2.52
RPS28AQ3E7X9 YGR174W-AYGR174W-A 87 nt-0.72□□□□□ -2.52
RPS28AQ3E7X9 YHL009W-BYHL009W-B 5409 nt-0.73□□□□□ -2.53
RPS28AQ3E7X9 YLR456WYLR456W 615 nt-0.73□□□□□ -2.53
RPS28AQ3E7X9 snR33snR33 183 nt-0.73□□□□□ -2.53
RPS28AQ3E7X9 PCC1YKR095W-A 267 nt-0.74□□□□□ -2.53
RPS28AQ3E7X9 YPL068CYPL068C 882 nt-0.75□□□□□ -2.53
RPS28AQ3E7X9 ISF1YMR081C 1017 nt-0.76□□□□□ -2.53
RPS28AQ3E7X9 YOR192C-CYOR192C-C 237 nt-0.76□□□□□ -2.53
RPS28AQ3E7X9 YLR041WYLR041W 321 nt-0.77□□□□□ -2.53
RPS28AQ3E7X9 HUG1YML058W-A 207 nt-0.77□□□□□ -2.53
RPS28AQ3E7X9 YBR099CYBR099C 384 nt-0.77□□□□□ -2.53
RPS28AQ3E7X9 YER084W-AYER084W-A 513 nt-0.78□□□□□ -2.53
RPS28AQ3E7X9 YHR138CYHR138C 345 nt-0.78□□□□□ -2.53
RPS28AQ3E7X9 YAR047CYAR047C 321 nt-0.78□□□□□ -2.53
RPS28AQ3E7X9 SNU13YEL026W 381 nt-0.8□□□□□ -2.54
RPS28AQ3E7X9 YJL026C-AYJL026C-A 222 nt-0.8□□□□□ -2.54
RPS28AQ3E7X9 PCF11YDR228C 1881 nt-0.8□□□□□ -2.54
RPS28AQ3E7X9 QCR9YGR183C 201 nt-0.81□□□□□ -2.54
RPS28AQ3E7X9 EAF6YJR082C 342 nt-0.81□□□□□ -2.54
RPS28AQ3E7X9 CBS1YDL069C 690 nt-0.82□□□□□ -2.54
RPS28AQ3E7X9 BLI1YKL061W 342 nt-0.82□□□□□ -2.54
RPS28AQ3E7X9 YHR007C-AYHR007C-A 216 nt-0.83□□□□□ -2.54
RPS28AQ3E7X9 YDL007C-AYDL007C-A 258 nt-0.84□□□□□ -2.54
RPS28AQ3E7X9 AIM29YKR074W 468 nt-0.85□□□□□ -2.55
RPS28AQ3E7X9 YAR029WYAR029W 225 nt-0.85□□□□□ -2.55
RPS28AQ3E7X9 snR161snR161 161 nt-0.85□□□□□ -2.55
RPS28AQ3E7X9 YBR072C-AYBR072C-A 162 nt-0.85□□□□□ -2.55
RPS28AQ3E7X9 YDR354C-AYDR354C-A 144 nt-0.87□□□□□ -2.55
RPS28AQ3E7X9 YMR158W-BYMR158W-B 321 nt-0.87□□□□□ -2.55
RPS28AQ3E7X9 YIL071W-AYIL071W-A 477 nt-0.88□□□□□ -2.55
RPS28AQ3E7X9 YHR130CYHR130C 336 nt-0.9□□□□□ -2.55
RPS28AQ3E7X9 EST1YLR233C 2100 nt-0.9□□□□□ -2.55
RPS28AQ3E7X9 YOR161W-AYOR161W-A 81 nt-0.9□□□□□ -2.55
RPS28AQ3E7X9 YKL100W-AYKL100W-A 90 nt-0.91□□□□□ -2.56
RPS28AQ3E7X9 snR36snR36 182 nt-0.91□□□□□ -2.56
RPS28AQ3E7X9 snR54snR54 86 nt-0.91□□□□□ -2.56
RPS28AQ3E7X9 COG6YNL041C 2520 nt-0.91□□□□□ -2.56
RPS28AQ3E7X9 YDR366CYDR366C 399 nt-0.92□□□□□ -2.56
RPS28AQ3E7X9 YEL020C-BYEL020C-B 198 nt-0.92□□□□□ -2.56
RPS28AQ3E7X9 YOR032W-AYOR032W-A 201 nt-0.93□□□□□ -2.56
RPS28AQ3E7X9 tA(UGC)QtA(UGC)Q 76 nt-0.94□□□□□ -2.56
RPS28AQ3E7X9 YFL012WYFL012W 447 nt-0.94□□□□□ -2.56
RPS28AQ3E7X9 AGA2YGL032C 264 nt-0.95□□□□□ -2.56
RPS28AQ3E7X9 YGL123C-AYGL123C-A 231 nt-0.95□□□□□ -2.56
RPS28AQ3E7X9 GLG1YKR058W 1851 nt-0.96□□□□□ -2.56
RPS28AQ3E7X9 BI2Q0110 1272 nt-0.96□□□□□ -2.56
RPS28AQ3E7X9 YER079WYER079W 633 nt-0.98□□□□□ -2.57
RPS28AQ3E7X9 STE18YJR086W 333 nt-1.01□□□□□ -2.57
RPS28AQ3E7X9 YKL123WYKL123W 381 nt-1.01□□□□□ -2.57
Retrieved 100 of 7,029 protein–RNA pairs in 952 ms