Protein–RNA interactions for Protein: Q03880

PKR1, V-type ATPase assembly factor PKR1, yeastyeast

Known RBP Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PKR1Q03880 YDL016CYDL016C 303 nt-0.56□□□□□ -2.5
PKR1Q03880 YLL006W-AYLL006W-A 177 nt-0.56□□□□□ -2.5
PKR1Q03880 YMR307C-AYMR307C-A 195 nt-0.57□□□□□ -2.5
PKR1Q03880 YNL058CYNL058C 951 nt-0.57□□□□□ -2.5
PKR1Q03880 YOR011W-AYOR011W-A 207 nt-0.57□□□□□ -2.5
PKR1Q03880 YHL041WYHL041W 450 nt-0.58□□□□□ -2.5
PKR1Q03880 HTB2YBL002W 396 nt-0.58□□□□□ -2.5
PKR1Q03880 YNL319WYNL319W 441 nt-0.58□□□□□ -2.5
PKR1Q03880 CSE1YGL238W 2883 nt-0.59□□□□□ -2.5
PKR1Q03880 YDL011CYDL011C 324 nt-0.59□□□□□ -2.5
PKR1Q03880 YCR018C-AYCR018C-A 255 nt-0.6□□□□□ -2.51
PKR1Q03880 SGF11YPL047W 300 nt-0.6□□□□□ -2.51
PKR1Q03880 MPC1YGL080W 393 nt-0.61□□□□□ -2.51
PKR1Q03880 TAR1YLR154W-C 375 nt-0.61□□□□□ -2.51
PKR1Q03880 snR46snR46 197 nt-0.61□□□□□ -2.51
PKR1Q03880 ECL1YGR146C 636 nt-0.62□□□□□ -2.51
PKR1Q03880 YPL225WYPL225W 441 nt-0.63□□□□□ -2.51
PKR1Q03880 DIE2YGR227W 1578 nt-0.63□□□□□ -2.51
PKR1Q03880 YPL229WYPL229W 621 nt-0.64□□□□□ -2.51
PKR1Q03880 YBL071CYBL071C 309 nt-0.65□□□□□ -2.51
PKR1Q03880 YPL205CYPL205C 345 nt-0.65□□□□□ -2.51
PKR1Q03880 YCR022CYCR022C 345 nt-0.66□□□□□ -2.52
PKR1Q03880 YIR030W-AYIR030W-A 384 nt-0.66□□□□□ -2.52
PKR1Q03880 GRX5YPL059W 453 nt-0.66□□□□□ -2.52
PKR1Q03880 YPR092WYPR092W 306 nt-0.66□□□□□ -2.52
PKR1Q03880 YFR009W-AYFR009W-A 258 nt-0.67□□□□□ -2.52
PKR1Q03880 HMRA2YCR096C 360 nt-0.68□□□□□ -2.52
PKR1Q03880 PCF11YDR228C 1881 nt-0.68□□□□□ -2.52
PKR1Q03880 ISF1YMR081C 1017 nt-0.68□□□□□ -2.52
PKR1Q03880 YPR002C-AYPR002C-A 198 nt-0.68□□□□□ -2.52
PKR1Q03880 YLR269CYLR269C 351 nt-0.69□□□□□ -2.52
PKR1Q03880 FYV7YLR068W 456 nt-0.7□□□□□ -2.52
PKR1Q03880 ZEO1YOL109W 342 nt-0.7□□□□□ -2.52
PKR1Q03880 YPR170W-AYPR170W-A 186 nt-0.73□□□□□ -2.53
PKR1Q03880 YKL083WYKL083W 615 nt-0.74□□□□□ -2.53
PKR1Q03880 YML007C-AYML007C-A 111 nt-0.74□□□□□ -2.53
PKR1Q03880 YLR287CYLR287C 1068 nt-0.75□□□□□ -2.53
PKR1Q03880 YLR334CYLR334C 381 nt-0.75□□□□□ -2.53
PKR1Q03880 URB1YKL014C 5295 nt-0.76□□□□□ -2.53
PKR1Q03880 UTP8YGR128C 2142 nt-0.77□□□□□ -2.53
PKR1Q03880 YLR282CYLR282C 342 nt-0.77□□□□□ -2.53
PKR1Q03880 YNL067W-BYNL067W-B 141 nt-0.77□□□□□ -2.53
PKR1Q03880 YBR099CYBR099C 384 nt-0.77□□□□□ -2.53
PKR1Q03880 YJL047C-AYJL047C-A 135 nt-0.78□□□□□ -2.53
PKR1Q03880 YJL120WYJL120W 324 nt-0.78□□□□□ -2.53
PKR1Q03880 RPS25BYLR333C 327 nt-0.78□□□□□ -2.53
PKR1Q03880 EST1YLR233C 2100 nt-0.79□□□□□ -2.54
PKR1Q03880 YDR426CYDR426C 378 nt-0.79□□□□□ -2.54
PKR1Q03880 GPI15YNL038W 690 nt-0.8□□□□□ -2.54
PKR1Q03880 YNL303WYNL303W 348 nt-0.8□□□□□ -2.54
PKR1Q03880 YHR138CYHR138C 345 nt-0.82□□□□□ -2.54
PKR1Q03880 YPL068CYPL068C 882 nt-0.82□□□□□ -2.54
PKR1Q03880 YMR158W-BYMR158W-B 321 nt-0.83□□□□□ -2.54
PKR1Q03880 YOR192C-CYOR192C-C 237 nt-0.83□□□□□ -2.54
PKR1Q03880 RPM2YML091C 3609 nt-0.83□□□□□ -2.54
PKR1Q03880 YIL071W-AYIL071W-A 477 nt-0.84□□□□□ -2.54
PKR1Q03880 BLI1YKL061W 342 nt-0.84□□□□□ -2.54
PKR1Q03880 YBR072C-AYBR072C-A 162 nt-0.84□□□□□ -2.54
PKR1Q03880 YDL007C-AYDL007C-A 258 nt-0.85□□□□□ -2.55
PKR1Q03880 SNU13YEL026W 381 nt-0.85□□□□□ -2.55
PKR1Q03880 YGR174W-AYGR174W-A 87 nt-0.86□□□□□ -2.55
PKR1Q03880 YOR161W-AYOR161W-A 81 nt-0.86□□□□□ -2.55
PKR1Q03880 snR33snR33 183 nt-0.87□□□□□ -2.55
PKR1Q03880 YDR354C-AYDR354C-A 144 nt-0.88□□□□□ -2.55
PKR1Q03880 YHR007C-AYHR007C-A 216 nt-0.89□□□□□ -2.55
PKR1Q03880 YHR125WYHR125W 306 nt-0.89□□□□□ -2.55
PKR1Q03880 YAR047CYAR047C 321 nt-0.89□□□□□ -2.55
PKR1Q03880 PCC1YKR095W-A 267 nt-0.9□□□□□ -2.55
PKR1Q03880 YLR285C-AYLR285C-A 171 nt-0.9□□□□□ -2.55
PKR1Q03880 YLR456WYLR456W 615 nt-0.9□□□□□ -2.55
PKR1Q03880 Q0255Q0255 1419 nt-0.9□□□□□ -2.55
PKR1Q03880 YLR041WYLR041W 321 nt-0.91□□□□□ -2.56
PKR1Q03880 YDR366CYDR366C 399 nt-0.93□□□□□ -2.56
PKR1Q03880 YER084W-AYER084W-A 513 nt-0.93□□□□□ -2.56
PKR1Q03880 tT(UGU)G1tT(UGU)G1 72 nt-0.93□□□□□ -2.56
PKR1Q03880 tT(UGU)G2tT(UGU)G2 72 nt-0.93□□□□□ -2.56
PKR1Q03880 tT(UGU)PtT(UGU)P 72 nt-0.93□□□□□ -2.56
PKR1Q03880 YJL026C-AYJL026C-A 222 nt-0.93□□□□□ -2.56
PKR1Q03880 tA(UGC)QtA(UGC)Q 76 nt-0.94□□□□□ -2.56
PKR1Q03880 YJL113WYJL113W 4647 nt-0.95□□□□□ -2.56
PKR1Q03880 CBS1YDL069C 690 nt-0.95□□□□□ -2.56
PKR1Q03880 YLR264C-AYLR264C-A 117 nt-0.96□□□□□ -2.56
PKR1Q03880 AIM29YKR074W 468 nt-0.97□□□□□ -2.56
PKR1Q03880 YGL123C-AYGL123C-A 231 nt-0.98□□□□□ -2.57
PKR1Q03880 YER079WYER079W 633 nt-0.99□□□□□ -2.57
PKR1Q03880 AGA2YGL032C 264 nt-1□□□□□ -2.57
PKR1Q03880 PAU9YBL108C-A 129 nt-1.01□□□□□ -2.57
PKR1Q03880 EAF6YJR082C 342 nt-1.02□□□□□ -2.57
PKR1Q03880 GLG1YKR058W 1851 nt-1.02□□□□□ -2.57
PKR1Q03880 SDH6YDR379C-A 240 nt-1.03□□□□□ -2.57
PKR1Q03880 YHR130CYHR130C 336 nt-1.04□□□□□ -2.58
PKR1Q03880 YFL012WYFL012W 447 nt-1.05□□□□□ -2.58
PKR1Q03880 YEL020C-BYEL020C-B 198 nt-1.06□□□□□ -2.58
PKR1Q03880 YKL100W-AYKL100W-A 90 nt-1.06□□□□□ -2.58
PKR1Q03880 YML100W-AYML100W-A 174 nt-1.06□□□□□ -2.58
PKR1Q03880 YAR029WYAR029W 225 nt-1.07□□□□□ -2.58
PKR1Q03880 snR54snR54 86 nt-1.09□□□□□ -2.58
PKR1Q03880 YPL060C-AYPL060C-A 3315 nt-1.1□□□□□ -2.59
PKR1Q03880 PRM3YPL192C 402 nt-1.11□□□□□ -2.59
PKR1Q03880 COG6YNL041C 2520 nt-1.12□□□□□ -2.59
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms