Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd3P97770 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.63■□□□□ 0.41
Thumpd3P97770 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd3P97770 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.63■□□□□ 0.41
Thumpd3P97770 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd3P97770 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd3P97770 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd3P97770 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd3P97770 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd3P97770 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.63■□□□□ 0.41
Thumpd3P97770 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
Thumpd3P97770 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd3P97770 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.63■□□□□ 0.41
Thumpd3P97770 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd3P97770 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd3P97770 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Thumpd3P97770 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Thumpd3P97770 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Thumpd3P97770 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.62■□□□□ 0.41
Thumpd3P97770 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Thumpd3P97770 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Gm10812-201ENSMUST00000099864 546 ntBASIC17.62■□□□□ 0.41
Thumpd3P97770 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Thumpd3P97770 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Thumpd3P97770 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd3P97770 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd3P97770 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Thumpd3P97770 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd3P97770 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.61■□□□□ 0.41
Thumpd3P97770 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.61■□□□□ 0.41
Thumpd3P97770 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd3P97770 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.61■□□□□ 0.41
Thumpd3P97770 Gm12896-201ENSMUST00000118430 226 ntBASIC17.61■□□□□ 0.41
Thumpd3P97770 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd3P97770 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd3P97770 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.61■□□□□ 0.41
Thumpd3P97770 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Thumpd3P97770 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd3P97770 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd3P97770 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd3P97770 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.61■□□□□ 0.41
Thumpd3P97770 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd3P97770 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Thumpd3P97770 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.61■□□□□ 0.41
Thumpd3P97770 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.6■□□□□ 0.41
Thumpd3P97770 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.6■□□□□ 0.41
Thumpd3P97770 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 Gm27275-201ENSMUST00000184318 272 ntBASIC17.6■□□□□ 0.41
Thumpd3P97770 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.6■□□□□ 0.41
Thumpd3P97770 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.6■□□□□ 0.41
Thumpd3P97770 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.6■□□□□ 0.41
Thumpd3P97770 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Thumpd3P97770 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.6■□□□□ 0.41
Thumpd3P97770 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.6■□□□□ 0.41
Thumpd3P97770 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.6■□□□□ 0.41
Thumpd3P97770 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Thumpd3P97770 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Thumpd3P97770 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.59■□□□□ 0.41
Thumpd3P97770 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.59■□□□□ 0.41
Thumpd3P97770 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Thumpd3P97770 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms