Protein–RNA interactions for Protein: P48415

SEC16, COPII coat assembly protein SEC16, yeastyeast

Known RBP Predictions only

Length 2,195 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC16P48415 YHL041WYHL041W 450 nt-0.35□□□□□ -2.46
SEC16P48415 YMR307C-AYMR307C-A 195 nt-0.36□□□□□ -2.47
SEC16P48415 snR33snR33 183 nt-0.36□□□□□ -2.47
SEC16P48415 YDL185C-AYDL185C-A 228 nt-0.37□□□□□ -2.47
SEC16P48415 YKL023C-AYKL023C-A 228 nt-0.37□□□□□ -2.47
SEC16P48415 YNL058CYNL058C 951 nt-0.37□□□□□ -2.47
SEC16P48415 IPP1YBR011C 864 nt-0.37□□□□□ -2.47
SEC16P48415 snR36snR36 182 nt-0.38□□□□□ -2.47
SEC16P48415 YCR018C-AYCR018C-A 255 nt-0.38□□□□□ -2.47
SEC16P48415 YIL071W-AYIL071W-A 477 nt-0.38□□□□□ -2.47
SEC16P48415 YLL006W-AYLL006W-A 177 nt-0.38□□□□□ -2.47
SEC16P48415 SOV1YMR066W 2697 nt-0.38□□□□□ -2.47
SEC16P48415 HMLALPHA2YCL067C 633 nt-0.39□□□□□ -2.47
SEC16P48415 MATALPHA2YCR039C 633 nt-0.39□□□□□ -2.47
SEC16P48415 HMRA2YCR096C 360 nt-0.39□□□□□ -2.47
SEC16P48415 RPS20YHL015W 366 nt-0.39□□□□□ -2.47
SEC16P48415 YHR131W-AYHR131W-A 246 nt-0.39□□□□□ -2.47
SEC16P48415 YCR022CYCR022C 345 nt-0.39□□□□□ -2.47
SEC16P48415 SEM1YDR363W-A 270 nt-0.39□□□□□ -2.47
SEC16P48415 SDH7YDR511W 402 nt-0.39□□□□□ -2.47
SEC16P48415 YNL319WYNL319W 441 nt-0.39□□□□□ -2.47
SEC16P48415 SCEIQ0160 708 nt-0.4□□□□□ -2.47
SEC16P48415 BER1YLR412W 825 nt-0.4□□□□□ -2.47
SEC16P48415 YER135CYER135C 393 nt-0.4□□□□□ -2.47
SEC16P48415 MND1YGL183C 660 nt-0.4□□□□□ -2.47
SEC16P48415 YJL047C-AYJL047C-A 135 nt-0.4□□□□□ -2.47
SEC16P48415 snR161snR161 161 nt-0.4□□□□□ -2.47
SEC16P48415 YPL068CYPL068C 882 nt-0.4□□□□□ -2.47
SEC16P48415 YDL011CYDL011C 324 nt-0.42□□□□□ -2.48
SEC16P48415 YPR002C-AYPR002C-A 198 nt-0.42□□□□□ -2.48
SEC16P48415 YLR334CYLR334C 381 nt-0.43□□□□□ -2.48
SEC16P48415 YPL205CYPL205C 345 nt-0.43□□□□□ -2.48
SEC16P48415 YDL016CYDL016C 303 nt-0.44□□□□□ -2.48
SEC16P48415 RPF1YHR088W 888 nt-0.44□□□□□ -2.48
SEC16P48415 YBL039C-AYBL039C-A 84 nt-0.44□□□□□ -2.48
SEC16P48415 tN(GUU)QtN(GUU)Q 71 nt-0.45□□□□□ -2.48
SEC16P48415 YBL071CYBL071C 309 nt-0.45□□□□□ -2.48
SEC16P48415 MRPS8YMR158W 468 nt-0.45□□□□□ -2.48
SEC16P48415 YOR345CYOR345C 351 nt-0.45□□□□□ -2.48
SEC16P48415 DIE2YGR227W 1578 nt-0.46□□□□□ -2.48
SEC16P48415 YIL029CYIL029C 429 nt-0.46□□□□□ -2.48
SEC16P48415 YJR087WYJR087W 351 nt-0.46□□□□□ -2.48
SEC16P48415 YLR287CYLR287C 1068 nt-0.47□□□□□ -2.48
SEC16P48415 YNL067W-BYNL067W-B 141 nt-0.47□□□□□ -2.48
SEC16P48415 ZEO1YOL109W 342 nt-0.47□□□□□ -2.48
SEC16P48415 SGF11YPL047W 300 nt-0.47□□□□□ -2.48
SEC16P48415 YHR138CYHR138C 345 nt-0.47□□□□□ -2.49
SEC16P48415 YCR100CYCR100C 951 nt-0.49□□□□□ -2.49
SEC16P48415 YPR092WYPR092W 306 nt-0.49□□□□□ -2.49
SEC16P48415 YJL120WYJL120W 324 nt-0.5□□□□□ -2.49
SEC16P48415 YBR099CYBR099C 384 nt-0.5□□□□□ -2.49
SEC16P48415 YAL066WYAL066W 309 nt-0.51□□□□□ -2.49
SEC16P48415 YPL229WYPL229W 621 nt-0.51□□□□□ -2.49
SEC16P48415 YAR047CYAR047C 321 nt-0.52□□□□□ -2.49
SEC16P48415 YNL303WYNL303W 348 nt-0.52□□□□□ -2.49
SEC16P48415 FYV7YLR068W 456 nt-0.52□□□□□ -2.49
SEC16P48415 TAR1YLR154W-C 375 nt-0.53□□□□□ -2.49
SEC16P48415 EST1YLR233C 2100 nt-0.53□□□□□ -2.5
SEC16P48415 YBR072C-AYBR072C-A 162 nt-0.54□□□□□ -2.5
SEC16P48415 RPS25BYLR333C 327 nt-0.55□□□□□ -2.5
SEC16P48415 YML007C-AYML007C-A 111 nt-0.55□□□□□ -2.5
SEC16P48415 URB1YKL014C 5295 nt-0.55□□□□□ -2.5
SEC16P48415 tA(UGC)QtA(UGC)Q 76 nt-0.55□□□□□ -2.5
SEC16P48415 YLR041WYLR041W 321 nt-0.55□□□□□ -2.5
SEC16P48415 GRX5YPL059W 453 nt-0.56□□□□□ -2.5
SEC16P48415 PCF11YDR228C 1881 nt-0.56□□□□□ -2.5
SEC16P48415 YKL083WYKL083W 615 nt-0.56□□□□□ -2.5
SEC16P48415 SNU13YEL026W 381 nt-0.57□□□□□ -2.5
SEC16P48415 YDR426CYDR426C 378 nt-0.57□□□□□ -2.5
SEC16P48415 YFL063WYFL063W 456 nt-0.57□□□□□ -2.5
SEC16P48415 Q0142Q0142 177 nt-0.58□□□□□ -2.5
SEC16P48415 YHR007C-AYHR007C-A 216 nt-0.59□□□□□ -2.5
SEC16P48415 YOL038C-AYOL038C-A 96 nt-0.59□□□□□ -2.5
SEC16P48415 YOR015WYOR015W 360 nt-0.59□□□□□ -2.5
SEC16P48415 YJL077W-AYJL077W-A 87 nt-0.6□□□□□ -2.51
SEC16P48415 BLI1YKL061W 342 nt-0.6□□□□□ -2.51
SEC16P48415 snR54snR54 86 nt-0.6□□□□□ -2.51
SEC16P48415 RPM2YML091C 3609 nt-0.6□□□□□ -2.51
SEC16P48415 MPC1YGL080W 393 nt-0.61□□□□□ -2.51
SEC16P48415 YLR282CYLR282C 342 nt-0.62□□□□□ -2.51
SEC16P48415 YHR125WYHR125W 306 nt-0.63□□□□□ -2.51
SEC16P48415 YIL002W-AYIL002W-A 210 nt-0.63□□□□□ -2.51
SEC16P48415 YAR029WYAR029W 225 nt-0.63□□□□□ -2.51
SEC16P48415 YDR354C-AYDR354C-A 144 nt-0.63□□□□□ -2.51
SEC16P48415 YGR174W-AYGR174W-A 87 nt-0.64□□□□□ -2.51
SEC16P48415 YLR456WYLR456W 615 nt-0.64□□□□□ -2.51
SEC16P48415 PCC1YKR095W-A 267 nt-0.65□□□□□ -2.51
SEC16P48415 CBS1YDL069C 690 nt-0.66□□□□□ -2.51
SEC16P48415 YEL020C-BYEL020C-B 198 nt-0.66□□□□□ -2.51
SEC16P48415 YDL007C-AYDL007C-A 258 nt-0.67□□□□□ -2.52
SEC16P48415 YKL100W-AYKL100W-A 90 nt-0.67□□□□□ -2.52
SEC16P48415 YMR158W-BYMR158W-B 321 nt-0.67□□□□□ -2.52
SEC16P48415 YER079WYER079W 633 nt-0.67□□□□□ -2.52
SEC16P48415 PAU9YBL108C-A 129 nt-0.67□□□□□ -2.52
SEC16P48415 YHR130CYHR130C 336 nt-0.69□□□□□ -2.52
SEC16P48415 AGA2YGL032C 264 nt-0.69□□□□□ -2.52
SEC16P48415 CSE2YNR010W 450 nt-0.7□□□□□ -2.52
SEC16P48415 YFL012WYFL012W 447 nt-0.7□□□□□ -2.52
SEC16P48415 YGL123C-AYGL123C-A 231 nt-0.7□□□□□ -2.52
SEC16P48415 YLR269CYLR269C 351 nt-0.7□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 80.8 ms