Protein–RNA interactions for Protein: P39111

VMA7, V-type proton ATPase subunit F, yeastyeast

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA7P39111 BER1YLR412W 825 nt-0.97□□□□□ -2.56
VMA7P39111 YOR011W-AYOR011W-A 207 nt-0.97□□□□□ -2.56
VMA7P39111 SVS1YPL163C 783 nt-0.97□□□□□ -2.56
VMA7P39111 YCR022CYCR022C 345 nt-0.98□□□□□ -2.57
VMA7P39111 YER175W-AYER175W-A 165 nt-0.98□□□□□ -2.57
VMA7P39111 SGF11YPL047W 300 nt-0.98□□□□□ -2.57
VMA7P39111 YGL230CYGL230C 444 nt-0.99□□□□□ -2.57
VMA7P39111 TAR1YLR154W-C 375 nt-1□□□□□ -2.57
VMA7P39111 YPR092WYPR092W 306 nt-1.01□□□□□ -2.57
VMA7P39111 GLG1YKR058W 1851 nt-1.02□□□□□ -2.57
VMA7P39111 YJL113WYJL113W 4647 nt-1.03□□□□□ -2.57
VMA7P39111 YIR021W-AYIR021W-A 213 nt-1.04□□□□□ -2.58
VMA7P39111 RPM2YML091C 3609 nt-1.06□□□□□ -2.58
VMA7P39111 YNL058CYNL058C 951 nt-1.06□□□□□ -2.58
VMA7P39111 YBR099CYBR099C 384 nt-1.07□□□□□ -2.58
VMA7P39111 PCF11YDR228C 1881 nt-1.07□□□□□ -2.58
VMA7P39111 tT(UGU)G1tT(UGU)G1 72 nt-1.08□□□□□ -2.58
VMA7P39111 tT(UGU)G2tT(UGU)G2 72 nt-1.08□□□□□ -2.58
VMA7P39111 tT(UGU)PtT(UGU)P 72 nt-1.08□□□□□ -2.58
VMA7P39111 YJR087WYJR087W 351 nt-1.08□□□□□ -2.58
VMA7P39111 YLR287CYLR287C 1068 nt-1.08□□□□□ -2.58
VMA7P39111 YKL044WYKL044W 321 nt-1.09□□□□□ -2.58
VMA7P39111 YIL029CYIL029C 429 nt-1.1□□□□□ -2.59
VMA7P39111 YJL020W-AYJL020W-A 258 nt-1.1□□□□□ -2.59
VMA7P39111 YHL041WYHL041W 450 nt-1.11□□□□□ -2.59
VMA7P39111 TSC3YBR058C-A 243 nt-1.11□□□□□ -2.59
VMA7P39111 HMLALPHA2YCL067C 633 nt-1.12□□□□□ -2.59
VMA7P39111 MATALPHA2YCR039C 633 nt-1.12□□□□□ -2.59
VMA7P39111 HMRA2YCR096C 360 nt-1.12□□□□□ -2.59
VMA7P39111 FYV7YLR068W 456 nt-1.12□□□□□ -2.59
VMA7P39111 ZEO1YOL109W 342 nt-1.12□□□□□ -2.59
VMA7P39111 YLR282CYLR282C 342 nt-1.13□□□□□ -2.59
VMA7P39111 YHR138CYHR138C 345 nt-1.14□□□□□ -2.59
VMA7P39111 EST1YLR233C 2100 nt-1.14□□□□□ -2.59
VMA7P39111 YDL011CYDL011C 324 nt-1.16□□□□□ -2.6
VMA7P39111 BLI1YKL061W 342 nt-1.17□□□□□ -2.6
VMA7P39111 YNL067W-BYNL067W-B 141 nt-1.18□□□□□ -2.6
VMA7P39111 YPL229WYPL229W 621 nt-1.18□□□□□ -2.6
VMA7P39111 YDL016CYDL016C 303 nt-1.19□□□□□ -2.6
VMA7P39111 YPR002C-AYPR002C-A 198 nt-1.19□□□□□ -2.6
VMA7P39111 SNU13YEL026W 381 nt-1.2□□□□□ -2.6
VMA7P39111 YIL071W-AYIL071W-A 477 nt-1.2□□□□□ -2.6
VMA7P39111 YJL120WYJL120W 324 nt-1.2□□□□□ -2.6
VMA7P39111 YDL007C-AYDL007C-A 258 nt-1.21□□□□□ -2.6
VMA7P39111 YJL026C-AYJL026C-A 222 nt-1.21□□□□□ -2.6
VMA7P39111 YMR158W-BYMR158W-B 321 nt-1.21□□□□□ -2.6
VMA7P39111 MRPS8YMR158W 468 nt-1.21□□□□□ -2.6
VMA7P39111 YBR072C-AYBR072C-A 162 nt-1.21□□□□□ -2.6
VMA7P39111 YCR100CYCR100C 951 nt-1.22□□□□□ -2.6
VMA7P39111 snR33snR33 183 nt-1.22□□□□□ -2.6
VMA7P39111 YHL009W-BYHL009W-B 5409 nt-1.23□□□□□ -2.61
VMA7P39111 YLR334CYLR334C 381 nt-1.23□□□□□ -2.61
VMA7P39111 YLR041WYLR041W 321 nt-1.24□□□□□ -2.61
VMA7P39111 RPS25BYLR333C 327 nt-1.24□□□□□ -2.61
VMA7P39111 YNL303WYNL303W 348 nt-1.25□□□□□ -2.61
VMA7P39111 snR36snR36 182 nt-1.25□□□□□ -2.61
VMA7P39111 YML007C-AYML007C-A 111 nt-1.26□□□□□ -2.61
VMA7P39111 YBL071CYBL071C 309 nt-1.26□□□□□ -2.61
VMA7P39111 tA(UGC)QtA(UGC)Q 76 nt-1.31□□□□□ -2.62
VMA7P39111 YDR426CYDR426C 378 nt-1.31□□□□□ -2.62
VMA7P39111 YKL083WYKL083W 615 nt-1.31□□□□□ -2.62
VMA7P39111 YOR161W-AYOR161W-A 81 nt-1.31□□□□□ -2.62
VMA7P39111 YPL068CYPL068C 882 nt-1.32□□□□□ -2.62
VMA7P39111 YDR354C-AYDR354C-A 144 nt-1.34□□□□□ -2.62
VMA7P39111 YDR366CYDR366C 399 nt-1.34□□□□□ -2.62
VMA7P39111 snR161snR161 161 nt-1.34□□□□□ -2.62
VMA7P39111 AGA2YGL032C 264 nt-1.35□□□□□ -2.63
VMA7P39111 YHR007C-AYHR007C-A 216 nt-1.35□□□□□ -2.63
VMA7P39111 GRX5YPL059W 453 nt-1.35□□□□□ -2.63
VMA7P39111 YLR269CYLR269C 351 nt-1.37□□□□□ -2.63
VMA7P39111 YGL123C-AYGL123C-A 231 nt-1.42□□□□□ -2.64
VMA7P39111 PCC1YKR095W-A 267 nt-1.43□□□□□ -2.64
VMA7P39111 YBR223W-AYBR223W-A 120 nt-1.43□□□□□ -2.64
VMA7P39111 YER079WYER079W 633 nt-1.44□□□□□ -2.64
VMA7P39111 YGR174W-AYGR174W-A 87 nt-1.44□□□□□ -2.64
VMA7P39111 YAL066WYAL066W 309 nt-1.45□□□□□ -2.64
VMA7P39111 COG6YNL041C 2520 nt-1.45□□□□□ -2.64
VMA7P39111 YCR038W-AYCR038W-A 126 nt-1.46□□□□□ -2.64
VMA7P39111 YKL100W-AYKL100W-A 90 nt-1.46□□□□□ -2.64
VMA7P39111 YLR264C-AYLR264C-A 117 nt-1.47□□□□□ -2.64
VMA7P39111 YML100W-AYML100W-A 174 nt-1.47□□□□□ -2.64
VMA7P39111 YAR029WYAR029W 225 nt-1.48□□□□□ -2.65
VMA7P39111 YLR456WYLR456W 615 nt-1.48□□□□□ -2.65
VMA7P39111 YPL060C-AYPL060C-A 3315 nt-1.48□□□□□ -2.65
VMA7P39111 YEL020C-BYEL020C-B 198 nt-1.5□□□□□ -2.65
VMA7P39111 YHR130CYHR130C 336 nt-1.51□□□□□ -2.65
VMA7P39111 YOR192C-CYOR192C-C 237 nt-1.51□□□□□ -2.65
VMA7P39111 SDH6YDR379C-A 240 nt-1.52□□□□□ -2.65
VMA7P39111 YAR047CYAR047C 321 nt-1.52□□□□□ -2.65
VMA7P39111 PAU9YBL108C-A 129 nt-1.52□□□□□ -2.65
VMA7P39111 YFR009W-AYFR009W-A 258 nt-1.53□□□□□ -2.65
VMA7P39111 YOL038C-AYOL038C-A 96 nt-1.53□□□□□ -2.65
VMA7P39111 TAH1YCR060W 336 nt-1.54□□□□□ -2.66
VMA7P39111 GPI15YNL038W 690 nt-1.55□□□□□ -2.66
VMA7P39111 AIM29YKR074W 468 nt-1.57□□□□□ -2.66
VMA7P39111 YFL012WYFL012W 447 nt-1.58□□□□□ -2.66
VMA7P39111 YJL182CYJL182C 318 nt-1.6□□□□□ -2.67
VMA7P39111 YHR125WYHR125W 306 nt-1.61□□□□□ -2.67
VMA7P39111 YFL063WYFL063W 456 nt-1.62□□□□□ -2.67
VMA7P39111 CBS1YDL069C 690 nt-1.63□□□□□ -2.67
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms