Protein–RNA interactions for Protein: P38751

SHU1, Suppressor of HU sensitivity involved in recombination protein 1, yeastyeast

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHU1P38751 YCR022CYCR022C 345 nt-0.69□□□□□ -2.52
SHU1P38751 MND1YGL183C 660 nt-0.69□□□□□ -2.52
SHU1P38751 TAR1YLR154W-C 375 nt-0.69□□□□□ -2.52
SHU1P38751 YPT6YLR262C 648 nt-0.69□□□□□ -2.52
SHU1P38751 YLR412C-AYLR412C-A 207 nt-0.69□□□□□ -2.52
SHU1P38751 PCF11YDR228C 1881 nt-0.71□□□□□ -2.52
SHU1P38751 YER175W-AYER175W-A 165 nt-0.71□□□□□ -2.52
SHU1P38751 SVS1YPL163C 783 nt-0.71□□□□□ -2.52
SHU1P38751 YPR170W-AYPR170W-A 186 nt-0.72□□□□□ -2.52
SHU1P38751 UTP8YGR128C 2142 nt-0.73□□□□□ -2.53
SHU1P38751 YHL041WYHL041W 450 nt-0.73□□□□□ -2.53
SHU1P38751 YIR021W-AYIR021W-A 213 nt-0.74□□□□□ -2.53
SHU1P38751 YJR087WYJR087W 351 nt-0.75□□□□□ -2.53
SHU1P38751 YLR287CYLR287C 1068 nt-0.75□□□□□ -2.53
SHU1P38751 YNL058CYNL058C 951 nt-0.75□□□□□ -2.53
SHU1P38751 YBR099CYBR099C 384 nt-0.75□□□□□ -2.53
SHU1P38751 TSC3YBR058C-A 243 nt-0.76□□□□□ -2.53
SHU1P38751 YJL020W-AYJL020W-A 258 nt-0.77□□□□□ -2.53
SHU1P38751 YKL044WYKL044W 321 nt-0.77□□□□□ -2.53
SHU1P38751 EST1YLR233C 2100 nt-0.77□□□□□ -2.53
SHU1P38751 YIL029CYIL029C 429 nt-0.78□□□□□ -2.53
SHU1P38751 YLR282CYLR282C 342 nt-0.78□□□□□ -2.53
SHU1P38751 YNL067W-BYNL067W-B 141 nt-0.78□□□□□ -2.53
SHU1P38751 YHR138CYHR138C 345 nt-0.79□□□□□ -2.54
SHU1P38751 ZEO1YOL109W 342 nt-0.79□□□□□ -2.54
SHU1P38751 HMLALPHA2YCL067C 633 nt-0.8□□□□□ -2.54
SHU1P38751 MATALPHA2YCR039C 633 nt-0.8□□□□□ -2.54
SHU1P38751 HMRA2YCR096C 360 nt-0.8□□□□□ -2.54
SHU1P38751 YDL011CYDL011C 324 nt-0.8□□□□□ -2.54
SHU1P38751 BLI1YKL061W 342 nt-0.81□□□□□ -2.54
SHU1P38751 FYV7YLR068W 456 nt-0.81□□□□□ -2.54
SHU1P38751 YIL071W-AYIL071W-A 477 nt-0.82□□□□□ -2.54
SHU1P38751 YPR002C-AYPR002C-A 198 nt-0.82□□□□□ -2.54
SHU1P38751 YCR100CYCR100C 951 nt-0.83□□□□□ -2.54
SHU1P38751 YDL007C-AYDL007C-A 258 nt-0.83□□□□□ -2.54
SHU1P38751 SNU13YEL026W 381 nt-0.83□□□□□ -2.54
SHU1P38751 YMR158W-BYMR158W-B 321 nt-0.83□□□□□ -2.54
SHU1P38751 YBR072C-AYBR072C-A 162 nt-0.83□□□□□ -2.54
SHU1P38751 YPL229WYPL229W 621 nt-0.84□□□□□ -2.54
SHU1P38751 snR33snR33 183 nt-0.84□□□□□ -2.54
SHU1P38751 RPM2YML091C 3609 nt-0.85□□□□□ -2.55
SHU1P38751 YJL120WYJL120W 324 nt-0.85□□□□□ -2.55
SHU1P38751 RPS25BYLR333C 327 nt-0.85□□□□□ -2.55
SHU1P38751 YLR334CYLR334C 381 nt-0.85□□□□□ -2.55
SHU1P38751 YBL071CYBL071C 309 nt-0.86□□□□□ -2.55
SHU1P38751 YJL113WYJL113W 4647 nt-0.87□□□□□ -2.55
SHU1P38751 YDL016CYDL016C 303 nt-0.87□□□□□ -2.55
SHU1P38751 MRPS8YMR158W 468 nt-0.87□□□□□ -2.55
SHU1P38751 YLR041WYLR041W 321 nt-0.88□□□□□ -2.55
SHU1P38751 YML007C-AYML007C-A 111 nt-0.88□□□□□ -2.55
SHU1P38751 YOR161W-AYOR161W-A 81 nt-0.88□□□□□ -2.55
SHU1P38751 GLG1YKR058W 1851 nt-0.88□□□□□ -2.55
SHU1P38751 YNL303WYNL303W 348 nt-0.89□□□□□ -2.55
SHU1P38751 YDR354C-AYDR354C-A 144 nt-0.9□□□□□ -2.55
SHU1P38751 YDR426CYDR426C 378 nt-0.9□□□□□ -2.55
SHU1P38751 YKL083WYKL083W 615 nt-0.9□□□□□ -2.55
SHU1P38751 YPL068CYPL068C 882 nt-0.9□□□□□ -2.55
SHU1P38751 tA(UGC)QtA(UGC)Q 76 nt-0.91□□□□□ -2.56
SHU1P38751 YDR366CYDR366C 399 nt-0.93□□□□□ -2.56
SHU1P38751 YHR007C-AYHR007C-A 216 nt-0.93□□□□□ -2.56
SHU1P38751 tT(UGU)G1tT(UGU)G1 72 nt-0.93□□□□□ -2.56
SHU1P38751 tT(UGU)G2tT(UGU)G2 72 nt-0.93□□□□□ -2.56
SHU1P38751 tT(UGU)PtT(UGU)P 72 nt-0.93□□□□□ -2.56
SHU1P38751 YLR269CYLR269C 351 nt-0.93□□□□□ -2.56
SHU1P38751 AGA2YGL032C 264 nt-0.96□□□□□ -2.56
SHU1P38751 YJL026C-AYJL026C-A 222 nt-0.96□□□□□ -2.56
SHU1P38751 GRX5YPL059W 453 nt-0.96□□□□□ -2.56
SHU1P38751 YGL123C-AYGL123C-A 231 nt-0.97□□□□□ -2.56
SHU1P38751 YER079WYER079W 633 nt-0.98□□□□□ -2.57
SHU1P38751 YLR264C-AYLR264C-A 117 nt-0.98□□□□□ -2.57
SHU1P38751 YHL009W-BYHL009W-B 5409 nt-1.01□□□□□ -2.57
SHU1P38751 YGR174W-AYGR174W-A 87 nt-1.01□□□□□ -2.57
SHU1P38751 PCC1YKR095W-A 267 nt-1.01□□□□□ -2.57
SHU1P38751 YAL066WYAL066W 309 nt-1.01□□□□□ -2.57
SHU1P38751 PAU9YBL108C-A 129 nt-1.01□□□□□ -2.57
SHU1P38751 YOR192C-CYOR192C-C 237 nt-1.01□□□□□ -2.57
SHU1P38751 YML100W-AYML100W-A 174 nt-1.02□□□□□ -2.57
SHU1P38751 SDH6YDR379C-A 240 nt-1.04□□□□□ -2.58
SHU1P38751 YHR130CYHR130C 336 nt-1.04□□□□□ -2.58
SHU1P38751 YKL100W-AYKL100W-A 90 nt-1.04□□□□□ -2.58
SHU1P38751 YLR456WYLR456W 615 nt-1.04□□□□□ -2.58
SHU1P38751 YAR047CYAR047C 321 nt-1.05□□□□□ -2.58
SHU1P38751 YEL020C-BYEL020C-B 198 nt-1.06□□□□□ -2.58
SHU1P38751 YFR009W-AYFR009W-A 258 nt-1.06□□□□□ -2.58
SHU1P38751 GPI15YNL038W 690 nt-1.06□□□□□ -2.58
SHU1P38751 YOL038C-AYOL038C-A 96 nt-1.06□□□□□ -2.58
SHU1P38751 YFL012WYFL012W 447 nt-1.07□□□□□ -2.58
SHU1P38751 AIM29YKR074W 468 nt-1.07□□□□□ -2.58
SHU1P38751 YAR029WYAR029W 225 nt-1.08□□□□□ -2.58
SHU1P38751 snR36snR36 182 nt-1.08□□□□□ -2.58
SHU1P38751 COG6YNL041C 2520 nt-1.1□□□□□ -2.58
SHU1P38751 YFL063WYFL063W 456 nt-1.12□□□□□ -2.59
SHU1P38751 YIL002W-AYIL002W-A 210 nt-1.12□□□□□ -2.59
SHU1P38751 YJL182CYJL182C 318 nt-1.12□□□□□ -2.59
SHU1P38751 CBS1YDL069C 690 nt-1.13□□□□□ -2.59
SHU1P38751 PRM3YPL192C 402 nt-1.13□□□□□ -2.59
SHU1P38751 YPL060C-AYPL060C-A 3315 nt-1.14□□□□□ -2.59
SHU1P38751 YER053C-AYER053C-A 114 nt-1.15□□□□□ -2.59
SHU1P38751 YER084W-AYER084W-A 513 nt-1.15□□□□□ -2.59
SHU1P38751 YHR125WYHR125W 306 nt-1.15□□□□□ -2.59
Retrieved 100 of 7,029 protein–RNA pairs in 30.2 ms