Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm28614-201ENSMUST00000186483 458 ntBASIC1.99□□□□□ -2.09
PrkdcP97313 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PrkdcP97313 AC162934.1-201ENSMUST00000222880 309 ntBASIC1.99□□□□□ -2.09
PrkdcP97313 AC090496.1-201ENSMUST00000226020 260 ntBASIC1.99□□□□□ -2.09
PrkdcP97313 Gm26449-201ENSMUST00000082452 104 ntBASIC1.99□□□□□ -2.09
PrkdcP97313 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PrkdcP97313 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PrkdcP97313 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
PrkdcP97313 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
PrkdcP97313 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
PrkdcP97313 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
PrkdcP97313 Gm14793-201ENSMUST00000118739 311 ntBASIC1.99□□□□□ -2.09
PrkdcP97313 Mup-ps13-201ENSMUST00000120662 545 ntBASIC1.99□□□□□ -2.09
PrkdcP97313 Gm21960-201ENSMUST00000181924 452 ntBASIC1.99□□□□□ -2.09
PrkdcP97313 CT025538.3-201ENSMUST00000225279 3848 ntBASIC1.99□□□□□ -2.09
PrkdcP97313 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
PrkdcP97313 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PrkdcP97313 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PrkdcP97313 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PrkdcP97313 Gm25421-201ENSMUST00000104218 164 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm22730-201ENSMUST00000158085 171 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm16236-201ENSMUST00000159588 379 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Mir8096-201ENSMUST00000184526 127 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm27369-201ENSMUST00000185182 71 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm19498-201ENSMUST00000191128 331 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm28639-201ENSMUST00000191519 481 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm44477-201ENSMUST00000199661 110 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PrkdcP97313 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
PrkdcP97313 Gm12954-201ENSMUST00000118610 611 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm14821-201ENSMUST00000121975 435 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm7855-201ENSMUST00000137737 687 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm22947-201ENSMUST00000158559 91 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PrkdcP97313 CT030247.1-201ENSMUST00000216810 267 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 AC153887.2-201ENSMUST00000219160 3838 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm5175-202ENSMUST00000219699 529 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PrkdcP97313 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
PrkdcP97313 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PrkdcP97313 AC131720.1-201ENSMUST00000218629 2132 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
PrkdcP97313 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PrkdcP97313 Gm27991-201ENSMUST00000184804 137 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 AC139294.1-201ENSMUST00000226708 571 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC1.98□□□□□ -2.09
PrkdcP97313 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC1.98□□□□□ -2.09
PrkdcP97313 Gm45039-201ENSMUST00000209181 3477 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC1.98□□□□□ -2.09
PrkdcP97313 Gm7327-201ENSMUST00000120925 652 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm23670-201ENSMUST00000157469 119 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm22532-201ENSMUST00000158822 140 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 Gm24177-201ENSMUST00000158927 131 ntBASIC1.98□□□□□ -2.09
PrkdcP97313 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PrkdcP97313 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PrkdcP97313 Gm43486-201ENSMUST00000196431 4339 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
PrkdcP97313 Gm37296-201ENSMUST00000192728 2922 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm13136-201ENSMUST00000121031 2950 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PrkdcP97313 Gm12956-201ENSMUST00000122184 414 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm24532-201ENSMUST00000157951 286 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 AC122301.1-201ENSMUST00000219625 507 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PrkdcP97313 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PrkdcP97313 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PrkdcP97313 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PrkdcP97313 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
PrkdcP97313 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
PrkdcP97313 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC1.97□□□□□ -2.09
PrkdcP97313 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
PrkdcP97313 Mir758-201ENSMUST00000103260 81 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm14506-201ENSMUST00000121165 536 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm17072-201ENSMUST00000166673 658 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm23162-201ENSMUST00000175081 121 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm28146-201ENSMUST00000185517 701 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm43975-201ENSMUST00000203023 481 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 AC139376.1-201ENSMUST00000220056 1250 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 AC154510.1-201ENSMUST00000223925 737 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm36969-201ENSMUST00000194551 2809 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
PrkdcP97313 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.97□□□□□ -2.09
PrkdcP97313 Mir669n-201ENSMUST00000158636 54 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm8580-201ENSMUST00000160295 464 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm23289-201ENSMUST00000175615 108 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm20718-201ENSMUST00000176058 259 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm29610-201ENSMUST00000187749 453 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm38330-201ENSMUST00000192743 959 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC1.97□□□□□ -2.09
PrkdcP97313 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC1.97□□□□□ -2.09
PrkdcP97313 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PrkdcP97313 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PrkdcP97313 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
PrkdcP97313 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.96□□□□□ -2.09
PrkdcP97313 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PrkdcP97313 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 151.3 ms