Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PrkdcP97313 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
PrkdcP97313 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PrkdcP97313 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PrkdcP97313 Gm32175-201ENSMUST00000193641 346 ntBASIC2.05□□□□□ -2.08
PrkdcP97313 Gm18672-201ENSMUST00000208035 270 ntBASIC2.05□□□□□ -2.08
PrkdcP97313 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PrkdcP97313 Gm9174-201ENSMUST00000078149 255 ntBASIC2.05□□□□□ -2.08
PrkdcP97313 Gm22155-201ENSMUST00000083836 162 ntBASIC2.05□□□□□ -2.08
PrkdcP97313 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.05□□□□□ -2.08
PrkdcP97313 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
PrkdcP97313 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
PrkdcP97313 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PrkdcP97313 Gm9078-201ENSMUST00000119126 617 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Gm13406-201ENSMUST00000121991 256 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Gm25113-201ENSMUST00000157185 143 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Gm26622-201ENSMUST00000180520 298 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.04□□□□□ -2.08
PrkdcP97313 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
PrkdcP97313 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
PrkdcP97313 Gm27445-201ENSMUST00000184484 72 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Gm44157-201ENSMUST00000204720 410 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Gm17989-201ENSMUST00000211543 412 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PrkdcP97313 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC2.04□□□□□ -2.08
PrkdcP97313 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PrkdcP97313 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
PrkdcP97313 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PrkdcP97313 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PrkdcP97313 Gm17030-201ENSMUST00000167016 393 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Gm27379-201ENSMUST00000183730 123 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Gm43264-201ENSMUST00000202284 325 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Gm17838-201ENSMUST00000205872 876 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC2.04□□□□□ -2.08
PrkdcP97313 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
PrkdcP97313 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
PrkdcP97313 Gm44682-201ENSMUST00000208501 2614 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 Gm13100-201ENSMUST00000117157 1439 ntBASIC2.04□□□□□ -2.08
PrkdcP97313 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.03□□□□□ -2.08
PrkdcP97313 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
PrkdcP97313 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
PrkdcP97313 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC2.03□□□□□ -2.08
PrkdcP97313 Gm16101-201ENSMUST00000160695 430 ntBASIC2.03□□□□□ -2.08
PrkdcP97313 Gm8282-201ENSMUST00000187559 483 ntBASIC2.03□□□□□ -2.08
PrkdcP97313 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.03□□□□□ -2.08
PrkdcP97313 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PrkdcP97313 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.03□□□□□ -2.08
PrkdcP97313 AC126253.2-201ENSMUST00000226518 205 ntBASIC2.03□□□□□ -2.08
PrkdcP97313 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
PrkdcP97313 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PrkdcP97313 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PrkdcP97313 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
PrkdcP97313 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
PrkdcP97313 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PrkdcP97313 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
PrkdcP97313 Gm5347-201ENSMUST00000210542 2327 ntBASIC2.03□□□□□ -2.08
PrkdcP97313 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC2.03□□□□□ -2.08
PrkdcP97313 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PrkdcP97313 Gm9251-201ENSMUST00000197202 628 ntBASIC2.03□□□□□ -2.08
PrkdcP97313 AC132384.13-201ENSMUST00000219556 1159 ntBASIC2.03□□□□□ -2.08
PrkdcP97313 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC2.03□□□□□ -2.08
PrkdcP97313 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PrkdcP97313 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PrkdcP97313 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
PrkdcP97313 Gm9208-201ENSMUST00000120468 948 ntBASIC2.03□□□□□ -2.08
PrkdcP97313 Gm38076-201ENSMUST00000193889 450 ntBASIC2.03□□□□□ -2.08
PrkdcP97313 Gm18327-201ENSMUST00000202426 830 ntBASIC2.03□□□□□ -2.08
PrkdcP97313 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.03□□□□□ -2.08
PrkdcP97313 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.03□□□□□ -2.08
PrkdcP97313 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PrkdcP97313 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.09
PrkdcP97313 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
PrkdcP97313 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PrkdcP97313 Gm23128-201ENSMUST00000104257 132 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Gm26015-201ENSMUST00000104402 125 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Gm13555-201ENSMUST00000121668 319 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Gm38008-201ENSMUST00000195333 518 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Gm23128-202ENSMUST00000196578 133 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Gm9377-201ENSMUST00000207227 623 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Gm25130-201ENSMUST00000082650 156 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PrkdcP97313 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
PrkdcP97313 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PrkdcP97313 Gm38240-201ENSMUST00000195110 2487 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PrkdcP97313 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PrkdcP97313 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PrkdcP97313 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
PrkdcP97313 Gm23980-201ENSMUST00000157135 158 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Gm5263-201ENSMUST00000163646 601 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Gm43476-201ENSMUST00000197873 405 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Gm18609-201ENSMUST00000203370 3601 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC2.02□□□□□ -2.09
PrkdcP97313 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PrkdcP97313 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 136.9 ms