Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col18a1P39061 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col18a1P39061 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col18a1P39061 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col18a1P39061 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col18a1P39061 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
Col18a1P39061 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Col18a1P39061 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col18a1P39061 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col18a1P39061 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Col18a1P39061 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col18a1P39061 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col18a1P39061 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col18a1P39061 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col18a1P39061 Gm25647-201ENSMUST00000101832 78 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 Gm25823-201ENSMUST00000101995 78 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 Gm22656-201ENSMUST00000104199 171 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 Mir466n-201ENSMUST00000104798 94 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 Gm12722-201ENSMUST00000118507 493 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col18a1P39061 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC5.65□□□□□ -1.51
Col18a1P39061 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC5.65□□□□□ -1.51
Col18a1P39061 Gm22381-201ENSMUST00000158186 107 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 Gm24220-201ENSMUST00000177753 79 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 Gm25988-201ENSMUST00000177759 79 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 Gm23471-201ENSMUST00000177886 79 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 Gm26488-201ENSMUST00000178225 79 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 Gm23449-201ENSMUST00000179208 79 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 Gm25221-201ENSMUST00000180051 79 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.65□□□□□ -1.51
Col18a1P39061 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col18a1P39061 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.65□□□□□ -1.51
Col18a1P39061 Gm43897-201ENSMUST00000204019 309 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC5.65□□□□□ -1.51
Col18a1P39061 Gm8748-201ENSMUST00000211125 587 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC5.65□□□□□ -1.51
Col18a1P39061 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Col18a1P39061 n-R5s94-201ENSMUST00000082573 119 ntBASIC5.65□□□□□ -1.51
Col18a1P39061 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col18a1P39061 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col18a1P39061 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col18a1P39061 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col18a1P39061 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col18a1P39061 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col18a1P39061 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col18a1P39061 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col18a1P39061 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col18a1P39061 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col18a1P39061 Gm24338-201ENSMUST00000104205 127 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Gm8217-201ENSMUST00000119136 465 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Gm12515-201ENSMUST00000120116 361 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col18a1P39061 Gm22216-201ENSMUST00000157557 114 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Gm23666-201ENSMUST00000158053 116 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Gm6264-202ENSMUST00000162896 1217 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col18a1P39061 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col18a1P39061 Gm37996-201ENSMUST00000191859 367 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col18a1P39061 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC5.64□□□□□ -1.51
Col18a1P39061 AC109172.2-201ENSMUST00000228792 381 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Gm10237-201ENSMUST00000078393 273 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col18a1P39061 Gm37655-201ENSMUST00000193968 4123 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.64□□□□□ -1.51
Col18a1P39061 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.64□□□□□ -1.51
Col18a1P39061 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col18a1P39061 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col18a1P39061 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.63□□□□□ -1.51
Col18a1P39061 Gm38699-201ENSMUST00000221301 1740 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col18a1P39061 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col18a1P39061 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col18a1P39061 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Col18a1P39061 Snord65-201ENSMUST00000104269 72 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Gm25272-201ENSMUST00000104293 128 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Snord72-201ENSMUST00000104549 81 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Gm13379-201ENSMUST00000118053 621 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Gm11862-201ENSMUST00000119678 659 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Gm22383-201ENSMUST00000158188 327 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Cfap61-214ENSMUST00000167179 183 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Gm10067-201ENSMUST00000179462 348 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Gm18448-201ENSMUST00000186286 599 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.63□□□□□ -1.51
Col18a1P39061 Gm37119-201ENSMUST00000195691 389 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Gm21006-201ENSMUST00000196930 667 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.63□□□□□ -1.51
Col18a1P39061 Gm7530-201ENSMUST00000218466 605 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 AC154640.2-201ENSMUST00000226324 472 ntBASIC5.63□□□□□ -1.51
Col18a1P39061 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col18a1P39061 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 243.1 ms