Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm8231-201ENSMUST00000221617 783 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col18a1P39061 Gm25403-201ENSMUST00000082971 143 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col18a1P39061 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Col18a1P39061 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col18a1P39061 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Col18a1P39061 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col18a1P39061 AC101945.4-201ENSMUST00000228464 1976 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col18a1P39061 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col18a1P39061 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col18a1P39061 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm18432-201ENSMUST00000195568 1451 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC5.67□□□□□ -1.5
Col18a1P39061 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col18a1P39061 Mir105-201ENSMUST00000104655 80 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm16431-201ENSMUST00000117454 431 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Col18a1P39061 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm37455-201ENSMUST00000191993 529 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm43825-201ENSMUST00000199650 734 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm43276-201ENSMUST00000199712 364 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC5.67□□□□□ -1.5
Col18a1P39061 AC132954.1-201ENSMUST00000221017 342 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Gm35558-202ENSMUST00000221819 499 ntBASIC5.67□□□□□ -1.5
Col18a1P39061 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.67□□□□□ -1.5
Col18a1P39061 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col18a1P39061 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Col18a1P39061 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col18a1P39061 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Col18a1P39061 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Col18a1P39061 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Col18a1P39061 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col18a1P39061 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col18a1P39061 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col18a1P39061 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col18a1P39061 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col18a1P39061 Mir466b-8-201ENSMUST00000103883 86 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm25765-201ENSMUST00000104100 132 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm11408-201ENSMUST00000117889 519 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm13771-201ENSMUST00000117988 238 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm14918-201ENSMUST00000118153 268 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Clec2f-201ENSMUST00000121051 374 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm26177-201ENSMUST00000178683 107 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm21726-201ENSMUST00000179654 392 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm37001-201ENSMUST00000193377 190 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm44300-201ENSMUST00000196792 121 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm42451-201ENSMUST00000197410 244 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Mir466e-201ENSMUST00000198862 84 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm43424-201ENSMUST00000200484 253 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm44824-201ENSMUST00000207021 229 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 AC127270.2-201ENSMUST00000221337 247 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC5.66□□□□□ -1.5
Col18a1P39061 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col18a1P39061 Ear14-201ENSMUST00000049559 468 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Col18a1P39061 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col18a1P39061 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Col18a1P39061 Gm8700-201ENSMUST00000222187 3054 ntBASIC5.66□□□□□ -1.5
Col18a1P39061 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col18a1P39061 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col18a1P39061 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.66□□□□□ -1.5
Col18a1P39061 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col18a1P39061 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col18a1P39061 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Col18a1P39061 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col18a1P39061 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col18a1P39061 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col18a1P39061 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col18a1P39061 Gm42717-201ENSMUST00000197309 3463 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Gm10241-201ENSMUST00000117664 286 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Gm9059-201ENSMUST00000118319 183 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Gm11869-201ENSMUST00000118701 329 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Gm13690-201ENSMUST00000118989 285 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Gm24909-201ENSMUST00000157290 280 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Gm23352-201ENSMUST00000158428 64 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col18a1P39061 Gm8774-201ENSMUST00000203621 692 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Gm45420-201ENSMUST00000211243 425 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Gm45530-201ENSMUST00000211658 225 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Gm7760-201ENSMUST00000212265 578 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 AC122465.3-201ENSMUST00000221644 355 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Gm6195-201ENSMUST00000063059 357 ntBASIC5.65□□□□□ -1.5
Col18a1P39061 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col18a1P39061 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col18a1P39061 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col18a1P39061 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col18a1P39061 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col18a1P39061 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col18a1P39061 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 148.4 ms