Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm25116-201ENSMUST00000157191 122 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Gm24898-201ENSMUST00000158133 106 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PrkdcP97313 Gm9890-201ENSMUST00000171867 537 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC2.15□□□□□ -2.07
PrkdcP97313 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PrkdcP97313 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PrkdcP97313 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC2.15□□□□□ -2.07
PrkdcP97313 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC2.15□□□□□ -2.07
PrkdcP97313 Gm19104-201ENSMUST00000198392 679 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Gm43651-201ENSMUST00000199796 439 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Gm19126-201ENSMUST00000207896 509 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
PrkdcP97313 Gm12586-201ENSMUST00000117328 1316 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Gm43834-201ENSMUST00000197097 4830 ntBASIC2.15□□□□□ -2.07
PrkdcP97313 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
PrkdcP97313 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PrkdcP97313 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC2.15□□□□□ -2.07
PrkdcP97313 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PrkdcP97313 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PrkdcP97313 Gm12568-201ENSMUST00000117362 624 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Gm13379-201ENSMUST00000118053 621 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Gm9435-201ENSMUST00000120379 877 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.14□□□□□ -2.07
PrkdcP97313 Gm16274-201ENSMUST00000139251 592 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.14□□□□□ -2.07
PrkdcP97313 Gm24240-201ENSMUST00000157785 135 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Gm10075-201ENSMUST00000162030 545 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Gm5527-201ENSMUST00000179821 642 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Gm27959-201ENSMUST00000185172 111 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Gm8319-201ENSMUST00000205708 641 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Gm44623-201ENSMUST00000207934 434 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
PrkdcP97313 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PrkdcP97313 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
PrkdcP97313 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PrkdcP97313 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
PrkdcP97313 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
PrkdcP97313 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PrkdcP97313 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PrkdcP97313 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PrkdcP97313 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PrkdcP97313 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
PrkdcP97313 Gm23060-201ENSMUST00000102345 109 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
PrkdcP97313 Gm12118-201ENSMUST00000119766 532 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 n-R5s45-201ENSMUST00000122592 110 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.14□□□□□ -2.07
PrkdcP97313 Gm22968-201ENSMUST00000157955 118 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Gm27220-201ENSMUST00000183453 262 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
PrkdcP97313 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PrkdcP97313 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC2.14□□□□□ -2.07
PrkdcP97313 Gm43369-201ENSMUST00000196373 1552 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PrkdcP97313 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PrkdcP97313 DQ267100-201ENSMUST00000122600 72 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Gm23591-201ENSMUST00000157663 286 ntBASIC2.14□□□□□ -2.07
PrkdcP97313 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC2.14□□□□□ -2.07
PrkdcP97313 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
PrkdcP97313 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
PrkdcP97313 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
PrkdcP97313 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC2.13□□□□□ -2.07
PrkdcP97313 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PrkdcP97313 Gm38020-201ENSMUST00000193066 4676 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 AC091683.1-201ENSMUST00000222307 2446 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PrkdcP97313 Gm12598-201ENSMUST00000117333 830 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 Gm12492-201ENSMUST00000117665 564 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 Gm15272-201ENSMUST00000120865 233 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 Gm8244-201ENSMUST00000121254 264 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PrkdcP97313 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PrkdcP97313 CT025680.1-201ENSMUST00000217375 375 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.13□□□□□ -2.07
PrkdcP97313 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PrkdcP97313 Mir410-201ENSMUST00000083563 81 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC2.13□□□□□ -2.07
PrkdcP97313 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PrkdcP97313 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
PrkdcP97313 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PrkdcP97313 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
PrkdcP97313 Gm24274-201ENSMUST00000116787 124 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.13□□□□□ -2.07
PrkdcP97313 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PrkdcP97313 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.13□□□□□ -2.07
PrkdcP97313 Gm18433-202ENSMUST00000195682 196 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 Gm43491-201ENSMUST00000197133 784 ntBASIC2.13□□□□□ -2.07
PrkdcP97313 AC115034.1-201ENSMUST00000215393 3846 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 122.9 ms