Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm3111-201ENSMUST00000167426 490 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col18a1P39061 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col18a1P39061 Gm28058-201ENSMUST00000186421 264 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Gm21088-201ENSMUST00000190875 316 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Gm44779-201ENSMUST00000206937 708 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.78□□□□□ -1.48
Col18a1P39061 AC122905.2-201ENSMUST00000220325 269 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC5.78□□□□□ -1.48
Col18a1P39061 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Gm24147-201ENSMUST00000082763 144 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col18a1P39061 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col18a1P39061 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Col18a1P39061 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Col18a1P39061 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col18a1P39061 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm23226-201ENSMUST00000116927 103 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 Gm12062-201ENSMUST00000117533 259 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 Gm11905-201ENSMUST00000117653 678 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 Gm15231-201ENSMUST00000119174 447 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 Gm12739-201ENSMUST00000119769 382 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm17154-201ENSMUST00000165748 431 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm23269-201ENSMUST00000178701 107 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col18a1P39061 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col18a1P39061 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.77□□□□□ -1.49
Col18a1P39061 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col18a1P39061 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col18a1P39061 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col18a1P39061 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col18a1P39061 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col18a1P39061 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col18a1P39061 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col18a1P39061 Gm24275-201ENSMUST00000116780 146 ntBASIC5.76□□□□□ -1.49
Col18a1P39061 Gm26347-201ENSMUST00000157526 131 ntBASIC5.76□□□□□ -1.49
Col18a1P39061 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC5.76□□□□□ -1.49
Col18a1P39061 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col18a1P39061 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC5.76□□□□□ -1.49
Col18a1P39061 Gm36964-201ENSMUST00000191876 198 ntBASIC5.76□□□□□ -1.49
Col18a1P39061 Gm17811-201ENSMUST00000206193 387 ntBASIC5.76□□□□□ -1.49
Col18a1P39061 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC5.76□□□□□ -1.49
Col18a1P39061 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.76□□□□□ -1.49
Col18a1P39061 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC5.76□□□□□ -1.49
Col18a1P39061 Gm5185-201ENSMUST00000080271 619 ntBASIC5.76□□□□□ -1.49
Col18a1P39061 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col18a1P39061 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col18a1P39061 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col18a1P39061 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col18a1P39061 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col18a1P39061 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Col18a1P39061 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col18a1P39061 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col18a1P39061 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col18a1P39061 AC154481.2-201ENSMUST00000222526 3175 ntBASIC5.76□□□□□ -1.49
Col18a1P39061 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col18a1P39061 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col18a1P39061 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Col18a1P39061 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col18a1P39061 Gm22590-201ENSMUST00000104247 128 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Col18a1P39061 Gm15268-201ENSMUST00000118845 352 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm12646-201ENSMUST00000119144 238 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm11742-201ENSMUST00000119903 233 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm14927-201ENSMUST00000120283 454 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm13852-201ENSMUST00000122350 242 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC5.75□□□□□ -1.49
Col18a1P39061 Gm24477-201ENSMUST00000157438 103 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm22314-201ENSMUST00000158007 281 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm22951-201ENSMUST00000179471 107 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.75□□□□□ -1.49
Col18a1P39061 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col18a1P39061 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col18a1P39061 Gm45192-201ENSMUST00000206749 283 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Gm42768-201ENSMUST00000197734 2897 ntBASIC5.75□□□□□ -1.49
Col18a1P39061 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col18a1P39061 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 295.5 ms