Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm36931-201ENSMUST00000192997 4801 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
PrkdcP97313 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PrkdcP97313 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PrkdcP97313 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PrkdcP97313 Gm22859-201ENSMUST00000174978 122 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Gm37741-201ENSMUST00000191768 1256 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PrkdcP97313 Gm21112-201ENSMUST00000212224 578 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Gm7760-201ENSMUST00000212265 578 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.19□□□□□ -2.06
PrkdcP97313 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PrkdcP97313 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
PrkdcP97313 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC2.18□□□□□ -2.06
PrkdcP97313 Gm43736-201ENSMUST00000196377 2281 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PrkdcP97313 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PrkdcP97313 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
PrkdcP97313 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PrkdcP97313 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PrkdcP97313 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PrkdcP97313 Gm13924-201ENSMUST00000119899 486 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PrkdcP97313 Gm28064-201ENSMUST00000185639 858 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Gm28118-201ENSMUST00000185957 294 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Gm7439-201ENSMUST00000214053 835 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PrkdcP97313 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PrkdcP97313 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PrkdcP97313 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PrkdcP97313 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PrkdcP97313 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PrkdcP97313 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PrkdcP97313 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC2.18□□□□□ -2.06
PrkdcP97313 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PrkdcP97313 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PrkdcP97313 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PrkdcP97313 Gm23951-201ENSMUST00000104029 132 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Gm12878-201ENSMUST00000118744 332 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC2.18□□□□□ -2.06
PrkdcP97313 Gm3123-201ENSMUST00000163480 480 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Gm4761-201ENSMUST00000178086 582 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.18□□□□□ -2.06
PrkdcP97313 Gm17893-201ENSMUST00000203017 770 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC2.18□□□□□ -2.06
PrkdcP97313 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PrkdcP97313 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PrkdcP97313 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PrkdcP97313 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PrkdcP97313 Gm7646-201ENSMUST00000198590 1346 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
PrkdcP97313 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
PrkdcP97313 Snora36b-201ENSMUST00000104383 132 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Gm8880-201ENSMUST00000121800 454 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PrkdcP97313 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Gm5058-201ENSMUST00000187331 463 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Gm37353-201ENSMUST00000194497 313 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 AC122937.1-201ENSMUST00000226405 793 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PrkdcP97313 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC2.18□□□□□ -2.06
PrkdcP97313 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PrkdcP97313 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
PrkdcP97313 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm38010-201ENSMUST00000192592 2784 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PrkdcP97313 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PrkdcP97313 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm10723-201ENSMUST00000195366 6918 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Mir378a-201ENSMUST00000198300 66 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 AC158631.2-201ENSMUST00000219999 478 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm28634-201ENSMUST00000191087 2613 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PrkdcP97313 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm14987-201ENSMUST00000117820 676 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Gm11881-201ENSMUST00000119408 572 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Gm25528-201ENSMUST00000180264 132 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Gm29668-201ENSMUST00000187802 315 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 Gm8874-201ENSMUST00000196826 286 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC2.17□□□□□ -2.06
PrkdcP97313 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.17□□□□□ -2.06
PrkdcP97313 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.17□□□□□ -2.06
PrkdcP97313 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 124.4 ms