Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm28232-201ENSMUST00000188683 315 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm28481-201ENSMUST00000189231 315 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm29059-201ENSMUST00000191534 315 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm37765-201ENSMUST00000192395 315 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm37237-201ENSMUST00000192893 315 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm36968-201ENSMUST00000193737 315 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm38290-201ENSMUST00000195238 315 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm17893-201ENSMUST00000203017 770 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm18855-201ENSMUST00000206689 570 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm45316-201ENSMUST00000210128 162 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm17829-201ENSMUST00000219782 344 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm25481-201ENSMUST00000083221 158 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col18a1P39061 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col18a1P39061 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col18a1P39061 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col18a1P39061 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col18a1P39061 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.8□□□□□ -1.48
Col18a1P39061 Gm18493-201ENSMUST00000192084 1612 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col18a1P39061 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col18a1P39061 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col18a1P39061 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col18a1P39061 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col18a1P39061 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Col18a1P39061 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col18a1P39061 Gm14785-201ENSMUST00000120185 539 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Gm22718-201ENSMUST00000122701 315 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Gm15508-201ENSMUST00000160330 325 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col18a1P39061 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col18a1P39061 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Gm6214-201ENSMUST00000178845 541 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col18a1P39061 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Gm33354-201ENSMUST00000195448 906 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC5.79□□□□□ -1.48
Col18a1P39061 Gm44463-201ENSMUST00000198895 137 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Igkv13-82-201ENSMUST00000200308 346 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Gm43440-201ENSMUST00000201957 729 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 AC174082.1-201ENSMUST00000221106 307 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Gm8288-201ENSMUST00000223406 593 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col18a1P39061 Gm24043-201ENSMUST00000083108 116 ntBASIC5.79□□□□□ -1.48
Col18a1P39061 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col18a1P39061 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col18a1P39061 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col18a1P39061 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col18a1P39061 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col18a1P39061 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col18a1P39061 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col18a1P39061 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col18a1P39061 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col18a1P39061 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col18a1P39061 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col18a1P39061 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.78□□□□□ -1.48
Col18a1P39061 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Col18a1P39061 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col18a1P39061 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col18a1P39061 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col18a1P39061 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Col18a1P39061 Gm26019-201ENSMUST00000104407 119 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Gm27999-201ENSMUST00000183539 193 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Gm29259-201ENSMUST00000186396 694 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col18a1P39061 Gm37616-201ENSMUST00000193974 322 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Gm18423-201ENSMUST00000205144 1074 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Gm45245-201ENSMUST00000210082 376 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col18a1P39061 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Col18a1P39061 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Col18a1P39061 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col18a1P39061 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col18a1P39061 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col18a1P39061 Gm44625-201ENSMUST00000207838 1561 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col18a1P39061 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col18a1P39061 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC5.78□□□□□ -1.48
Col18a1P39061 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col18a1P39061 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col18a1P39061 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col18a1P39061 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col18a1P39061 Zfp389-201ENSMUST00000118425 675 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Gm14605-201ENSMUST00000120599 268 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Gm11200-201ENSMUST00000121698 448 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Gm22320-201ENSMUST00000157149 312 ntBASIC5.78□□□□□ -1.48
Col18a1P39061 Gm24059-201ENSMUST00000157493 312 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 143.6 ms