Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.59■□□□□ 0.73
Hmgn5Q9JL35 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgn5Q9JL35 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Hmgn5Q9JL35 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.58■□□□□ 0.73
Hmgn5Q9JL35 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgn5Q9JL35 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Hmgn5Q9JL35 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgn5Q9JL35 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgn5Q9JL35 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Hmgn5Q9JL35 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgn5Q9JL35 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Hmgn5Q9JL35 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgn5Q9JL35 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 Gm43017-201ENSMUST00000198296 752 ntBASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 Gm29791-202ENSMUST00000207888 369 ntBASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hmgn5Q9JL35 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hmgn5Q9JL35 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hmgn5Q9JL35 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn5Q9JL35 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.55■□□□□ 0.72
Hmgn5Q9JL35 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn5Q9JL35 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn5Q9JL35 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn5Q9JL35 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn5Q9JL35 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hmgn5Q9JL35 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hmgn5Q9JL35 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Hmgn5Q9JL35 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Gm27454-201ENSMUST00000185090 204 ntBASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hmgn5Q9JL35 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms