Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
Uspl1Q3ULM6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Uspl1Q3ULM6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Uspl1Q3ULM6 Gm16499-203ENSMUST00000204633 2177 ntBASIC22.45■■□□□ 1.18
Uspl1Q3ULM6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Uspl1Q3ULM6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC22.45■■□□□ 1.18
Uspl1Q3ULM6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Uspl1Q3ULM6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Uspl1Q3ULM6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC22.45■■□□□ 1.18
Uspl1Q3ULM6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC22.45■■□□□ 1.18
Uspl1Q3ULM6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Uspl1Q3ULM6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Uspl1Q3ULM6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 Gm4217-201ENSMUST00000182243 1002 ntBASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Uspl1Q3ULM6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Gm11539-201ENSMUST00000119837 557 ntBASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Gm13436-201ENSMUST00000120418 567 ntBASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Mir6982-201ENSMUST00000184354 68 ntBASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Gm30025-201ENSMUST00000218555 728 ntBASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Uspl1Q3ULM6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Uspl1Q3ULM6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC22.42■■□□□ 1.18
Uspl1Q3ULM6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Uspl1Q3ULM6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Uspl1Q3ULM6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Uspl1Q3ULM6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Uspl1Q3ULM6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Uspl1Q3ULM6 Gm15565-201ENSMUST00000118890 427 ntBASIC22.42■■□□□ 1.18
Uspl1Q3ULM6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC22.42■■□□□ 1.18
Uspl1Q3ULM6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Uspl1Q3ULM6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Uspl1Q3ULM6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Gm13559-201ENSMUST00000120476 863 ntBASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Uspl1Q3ULM6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Uspl1Q3ULM6 Gm5898-201ENSMUST00000121016 2071 ntBASIC22.4■■□□□ 1.18
Uspl1Q3ULM6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Uspl1Q3ULM6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Uspl1Q3ULM6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
Uspl1Q3ULM6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Uspl1Q3ULM6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Uspl1Q3ULM6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Uspl1Q3ULM6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Uspl1Q3ULM6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Uspl1Q3ULM6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Uspl1Q3ULM6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Uspl1Q3ULM6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Uspl1Q3ULM6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC22.39■■□□□ 1.18
Uspl1Q3ULM6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Uspl1Q3ULM6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Uspl1Q3ULM6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Uspl1Q3ULM6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Uspl1Q3ULM6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Uspl1Q3ULM6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC22.39■■□□□ 1.17
Uspl1Q3ULM6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
Uspl1Q3ULM6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.39■■□□□ 1.17
Uspl1Q3ULM6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Uspl1Q3ULM6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Uspl1Q3ULM6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Uspl1Q3ULM6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC22.39■■□□□ 1.17
Uspl1Q3ULM6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Uspl1Q3ULM6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Uspl1Q3ULM6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms