Protein–RNA interactions for Protein: P22147

XRN1, 5'-3' exoribonuclease 1, yeastyeast

Known RBP Predictions only

Length 1,528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XRN1P22147 YOL160WYOL160W 342 nt-0.88□□□□□ -2.55
XRN1P22147 YOR345CYOR345C 351 nt-0.88□□□□□ -2.55
XRN1P22147 QCR7YDR529C 384 nt-0.89□□□□□ -2.55
XRN1P22147 YAP6YDR259C 1152 nt-0.89□□□□□ -2.55
XRN1P22147 YER138W-AYER138W-A 105 nt-0.89□□□□□ -2.55
XRN1P22147 POP6YGR030C 477 nt-0.89□□□□□ -2.55
XRN1P22147 UBS1YBR165W 834 nt-0.89□□□□□ -2.55
XRN1P22147 snR36snR36 182 nt-0.89□□□□□ -2.55
XRN1P22147 YJL120WYJL120W 324 nt-0.9□□□□□ -2.55
XRN1P22147 YPL205CYPL205C 345 nt-0.9□□□□□ -2.55
XRN1P22147 SNU56YDR240C 1479 nt-0.9□□□□□ -2.55
XRN1P22147 RMD6YEL072W 696 nt-0.93□□□□□ -2.56
XRN1P22147 YBR121C-AYBR121C-A 159 nt-0.93□□□□□ -2.56
XRN1P22147 DIE2YGR227W 1578 nt-0.93□□□□□ -2.56
XRN1P22147 IRC2YDR112W 309 nt-0.94□□□□□ -2.56
XRN1P22147 YFR012W-AYFR012W-A 87 nt-0.94□□□□□ -2.56
XRN1P22147 tT(UGU)Q1tT(UGU)Q1 76 nt-0.94□□□□□ -2.56
XRN1P22147 YOR248WYOR248W 303 nt-0.94□□□□□ -2.56
XRN1P22147 snR59snR59 78 nt-0.94□□□□□ -2.56
XRN1P22147 YHL046W-AYHL046W-A 327 nt-0.94□□□□□ -2.56
XRN1P22147 PBI2YNL015W 228 nt-0.94□□□□□ -2.56
XRN1P22147 YOL106WYOL106W 354 nt-0.94□□□□□ -2.56
XRN1P22147 snR33snR33 183 nt-0.94□□□□□ -2.56
XRN1P22147 ATC1YDR184C 885 nt-0.95□□□□□ -2.56
XRN1P22147 BLS1YLR408C 369 nt-0.95□□□□□ -2.56
XRN1P22147 YHR131W-AYHR131W-A 246 nt-0.96□□□□□ -2.56
XRN1P22147 YOR020W-AYOR020W-A 273 nt-0.96□□□□□ -2.56
XRN1P22147 YLL006W-AYLL006W-A 177 nt-0.97□□□□□ -2.56
XRN1P22147 YNL067W-AYNL067W-A 147 nt-0.97□□□□□ -2.56
XRN1P22147 snR57snR57 88 nt-0.98□□□□□ -2.57
XRN1P22147 YHR054CYHR054C 1065 nt-0.98□□□□□ -2.57
XRN1P22147 YBL008W-AYBL008W-A 240 nt-0.98□□□□□ -2.57
XRN1P22147 PSF2YJL072C 642 nt-0.99□□□□□ -2.57
XRN1P22147 YLR198CYLR198C 360 nt-0.99□□□□□ -2.57
XRN1P22147 SPO21YOL091W 1830 nt-0.99□□□□□ -2.57
XRN1P22147 YCR024C-BYCR024C-B 267 nt-0.99□□□□□ -2.57
XRN1P22147 SEM1YDR363W-A 270 nt-0.99□□□□□ -2.57
XRN1P22147 YPR096CYPR096C 303 nt-0.99□□□□□ -2.57
XRN1P22147 YDR269CYDR269C 324 nt-1□□□□□ -2.57
XRN1P22147 YGL258W-AYGL258W-A 234 nt-1□□□□□ -2.57
XRN1P22147 YGR115CYGR115C 780 nt-1□□□□□ -2.57
XRN1P22147 YMR075C-AYMR075C-A 366 nt-1.01□□□□□ -2.57
XRN1P22147 MRPS8YMR158W 468 nt-1.01□□□□□ -2.57
XRN1P22147 YLR287CYLR287C 1068 nt-1.02□□□□□ -2.57
XRN1P22147 IPP1YBR011C 864 nt-1.02□□□□□ -2.57
XRN1P22147 tN(GUU)QtN(GUU)Q 71 nt-1.04□□□□□ -2.58
XRN1P22147 YKL068W-AYKL068W-A 237 nt-1.04□□□□□ -2.58
XRN1P22147 COX7YMR256C 183 nt-1.04□□□□□ -2.58
XRN1P22147 YIR044CYIR044C 186 nt-1.05□□□□□ -2.58
XRN1P22147 YOR015WYOR015W 360 nt-1.05□□□□□ -2.58
XRN1P22147 YPL261CYPL261C 309 nt-1.05□□□□□ -2.58
XRN1P22147 ECL1YGR146C 636 nt-1.06□□□□□ -2.58
XRN1P22147 YML108WYML108W 318 nt-1.08□□□□□ -2.58
XRN1P22147 DCP1YOL149W 696 nt-1.08□□□□□ -2.58
XRN1P22147 GPX1YKL026C 504 nt-1.09□□□□□ -2.58
XRN1P22147 YLR171WYLR171W 390 nt-1.09□□□□□ -2.58
XRN1P22147 YMR307C-AYMR307C-A 195 nt-1.09□□□□□ -2.58
XRN1P22147 GRX5YPL059W 453 nt-1.1□□□□□ -2.58
XRN1P22147 YER188C-AYER188C-A 300 nt-1.1□□□□□ -2.59
XRN1P22147 LIN1YHR156C 1023 nt-1.1□□□□□ -2.59
XRN1P22147 ACF4YJR083C 930 nt-1.1□□□□□ -2.59
XRN1P22147 YNL319WYNL319W 441 nt-1.1□□□□□ -2.59
XRN1P22147 LRP1YHR081W 555 nt-1.11□□□□□ -2.59
XRN1P22147 YKL111CYKL111C 336 nt-1.11□□□□□ -2.59
XRN1P22147 YMR304C-AYMR304C-A 351 nt-1.12□□□□□ -2.59
XRN1P22147 YOR366WYOR366W 354 nt-1.12□□□□□ -2.59
XRN1P22147 YNL067W-BYNL067W-B 141 nt-1.14□□□□□ -2.59
XRN1P22147 CWC23YGL128C 852 nt-1.15□□□□□ -2.59
XRN1P22147 RPS20YHL015W 366 nt-1.15□□□□□ -2.59
XRN1P22147 YLR163W-AYLR163W-A 114 nt-1.15□□□□□ -2.59
XRN1P22147 POL32YJR043C 1053 nt-1.15□□□□□ -2.59
XRN1P22147 YOR364WYOR364W 369 nt-1.15□□□□□ -2.59
XRN1P22147 RPS25BYLR333C 327 nt-1.16□□□□□ -2.6
XRN1P22147 YIL071W-AYIL071W-A 477 nt-1.17□□□□□ -2.6
XRN1P22147 tA(UGC)QtA(UGC)Q 76 nt-1.18□□□□□ -2.6
XRN1P22147 YHR138CYHR138C 345 nt-1.18□□□□□ -2.6
XRN1P22147 YGR228WYGR228W 345 nt-1.19□□□□□ -2.6
XRN1P22147 YKL202WYKL202W 582 nt-1.19□□□□□ -2.6
XRN1P22147 IRC16YPR038W 360 nt-1.19□□□□□ -2.6
XRN1P22147 YBR099CYBR099C 384 nt-1.2□□□□□ -2.6
XRN1P22147 YHR050W-AYHR050W-A 171 nt-1.2□□□□□ -2.6
XRN1P22147 YML007C-AYML007C-A 111 nt-1.2□□□□□ -2.6
XRN1P22147 IRC13YOR235W 315 nt-1.21□□□□□ -2.6
XRN1P22147 PCF11YDR228C 1881 nt-1.23□□□□□ -2.61
XRN1P22147 RPS30AYLR287C-A 192 nt-1.23□□□□□ -2.61
XRN1P22147 YOL029CYOL029C 606 nt-1.23□□□□□ -2.61
XRN1P22147 YDL185C-AYDL185C-A 228 nt-1.24□□□□□ -2.61
XRN1P22147 YGL239CYGL239C 315 nt-1.24□□□□□ -2.61
XRN1P22147 YDL007C-AYDL007C-A 258 nt-1.25□□□□□ -2.61
XRN1P22147 RRI2YOL117W 1938 nt-1.25□□□□□ -2.61
XRN1P22147 YBL107W-AYBL107W-A 105 nt-1.25□□□□□ -2.61
XRN1P22147 EST1YLR233C 2100 nt-1.26□□□□□ -2.61
XRN1P22147 YLR041WYLR041W 321 nt-1.26□□□□□ -2.61
XRN1P22147 ATG31YDR022C 591 nt-1.27□□□□□ -2.61
XRN1P22147 YNL146C-AYNL146C-A 195 nt-1.27□□□□□ -2.61
XRN1P22147 YOR011W-AYOR011W-A 207 nt-1.27□□□□□ -2.61
XRN1P22147 YCR018C-AYCR018C-A 255 nt-1.28□□□□□ -2.61
XRN1P22147 snR5snR5 204 nt-1.28□□□□□ -2.61
XRN1P22147 RPF1YHR088W 888 nt-1.28□□□□□ -2.61
XRN1P22147 VAM3YOR106W 852 nt-1.28□□□□□ -2.61
Retrieved 100 of 7,029 protein–RNA pairs in 43 ms