Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm23104-201ENSMUST00000083722 104 ntBASIC5.85□□□□□ -1.47
Col18a1P39061 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Col18a1P39061 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col18a1P39061 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col18a1P39061 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col18a1P39061 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Col18a1P39061 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col18a1P39061 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col18a1P39061 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col18a1P39061 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col18a1P39061 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col18a1P39061 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col18a1P39061 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col18a1P39061 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col18a1P39061 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
Col18a1P39061 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 Gm12173-201ENSMUST00000117622 273 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 Gm11598-201ENSMUST00000119257 357 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 Gm7071-201ENSMUST00000120458 462 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 Gm25667-201ENSMUST00000157701 275 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 Gm24438-201ENSMUST00000157893 115 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 Gm9613-201ENSMUST00000171662 196 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 Gm28956-201ENSMUST00000189047 427 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 Gm37050-201ENSMUST00000193464 466 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.84□□□□□ -1.47
Col18a1P39061 Gm45689-201ENSMUST00000210522 133 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 Gm18557-201ENSMUST00000218710 433 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 AC153662.1-201ENSMUST00000222220 270 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 AC173481.1-201ENSMUST00000223351 270 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 AC154600.1-201ENSMUST00000226480 714 ntBASIC5.84□□□□□ -1.47
Col18a1P39061 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col18a1P39061 AC123858.1-201ENSMUST00000226948 1874 ntBASIC5.84□□□□□ -1.48
Col18a1P39061 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Col18a1P39061 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Col18a1P39061 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.84□□□□□ -1.48
Col18a1P39061 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
Col18a1P39061 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col18a1P39061 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.83□□□□□ -1.48
Col18a1P39061 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col18a1P39061 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col18a1P39061 Gm2348-201ENSMUST00000108782 300 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Col18a1P39061 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.83□□□□□ -1.48
Col18a1P39061 Gm26036-201ENSMUST00000158149 144 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm7241-201ENSMUST00000159853 357 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm17109-201ENSMUST00000163985 358 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col18a1P39061 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm42924-201ENSMUST00000197261 185 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.83□□□□□ -1.48
Col18a1P39061 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col18a1P39061 Mir365-2-201ENSMUST00000083555 112 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm26108-201ENSMUST00000083973 191 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm7739-201ENSMUST00000221131 1560 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col18a1P39061 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.83□□□□□ -1.48
Col18a1P39061 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col18a1P39061 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Col18a1P39061 Gm15313-201ENSMUST00000119179 282 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm12873-201ENSMUST00000119988 422 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm25979-201ENSMUST00000157177 138 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm23028-201ENSMUST00000158773 265 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col18a1P39061 Gm23047-201ENSMUST00000177661 94 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm25944-201ENSMUST00000178758 94 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC5.83□□□□□ -1.48
Col18a1P39061 AC161520.1-201ENSMUST00000210954 939 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC5.83□□□□□ -1.48
Col18a1P39061 Gm18729-201ENSMUST00000217230 621 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.83□□□□□ -1.48
Col18a1P39061 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col18a1P39061 Gm25739-201ENSMUST00000082886 107 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col18a1P39061 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.83□□□□□ -1.48
Col18a1P39061 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.82□□□□□ -1.48
Col18a1P39061 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col18a1P39061 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Col18a1P39061 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col18a1P39061 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col18a1P39061 Mir7578-201ENSMUST00000183455 82 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 Gm7634-201ENSMUST00000185778 553 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 Gm3933-201ENSMUST00000195391 439 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 Ighv1-68-201ENSMUST00000198789 294 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 Gm19441-201ENSMUST00000221545 330 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
Col18a1P39061 Gm9309-201ENSMUST00000223537 546 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.82□□□□□ -1.48
Col18a1P39061 AC168059.1-201ENSMUST00000225846 841 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 226 ms