Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Mir6400-201ENSMUST00000184870 92 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Mir7674-201ENSMUST00000184964 63 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm29484-201ENSMUST00000186067 324 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm10193-201ENSMUST00000188288 231 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm28883-201ENSMUST00000189256 369 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm8874-201ENSMUST00000196826 286 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm45063-201ENSMUST00000203726 472 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm32453-201ENSMUST00000204183 456 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm44817-201ENSMUST00000205416 453 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm44634-201ENSMUST00000206119 152 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm3690-201ENSMUST00000211341 262 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm18903-201ENSMUST00000215343 480 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm46193-201ENSMUST00000219399 364 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 AC154552.4-201ENSMUST00000222171 151 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 AC154506.1-201ENSMUST00000225178 621 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm6177-201ENSMUST00000085589 465 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.73□□□□□ -1.65
Rnft1Q9DCN7 Gm15975-201ENSMUST00000122385 1402 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm11878-201ENSMUST00000117908 400 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm22519-201ENSMUST00000158270 178 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm23179-201ENSMUST00000158693 304 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Mir5106-201ENSMUST00000174936 73 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm24757-201ENSMUST00000176987 371 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm25284-201ENSMUST00000180345 141 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm19206-201ENSMUST00000186401 827 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm28429-201ENSMUST00000188521 363 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm28957-201ENSMUST00000190174 373 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm43494-201ENSMUST00000197672 388 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm44523-201ENSMUST00000205616 417 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm44779-201ENSMUST00000206937 708 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 AC123665.6-201ENSMUST00000228568 538 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Mir181a-2-201ENSMUST00000083489 76 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Rnft1Q9DCN7 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Rnft1Q9DCN7 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Rnft1Q9DCN7 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Gm25213-201ENSMUST00000102388 113 ntBASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Gm23750-201ENSMUST00000104222 132 ntBASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Gm24608-201ENSMUST00000104381 136 ntBASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Gm13672-201ENSMUST00000117554 459 ntBASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Gm11971-201ENSMUST00000117715 288 ntBASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Gm12515-201ENSMUST00000120116 361 ntBASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Gm22725-201ENSMUST00000158092 110 ntBASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Gm16557-201ENSMUST00000159182 191 ntBASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Gm16566-201ENSMUST00000160387 910 ntBASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.71□□□□□ -1.66
Rnft1Q9DCN7 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 176.2 ms