Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col18a1P39061 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col18a1P39061 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col18a1P39061 AC162910.1-201ENSMUST00000221219 1723 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col18a1P39061 Gm11575-201ENSMUST00000122243 228 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 Gm13368-201ENSMUST00000122443 430 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC5.94□□□□□ -1.46
Col18a1P39061 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC5.94□□□□□ -1.46
Col18a1P39061 Gm23897-201ENSMUST00000158110 158 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 Gm16290-201ENSMUST00000161175 474 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 Gm8338-201ENSMUST00000163928 363 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 Gm9294-201ENSMUST00000165198 789 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 Mir1251-201ENSMUST00000175486 84 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 Gm27249-201ENSMUST00000185049 328 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC5.94□□□□□ -1.46
Col18a1P39061 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
Col18a1P39061 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 Gm9373-201ENSMUST00000208724 599 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col18a1P39061 Gm7380-201ENSMUST00000211599 466 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col18a1P39061 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Col18a1P39061 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
Col18a1P39061 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col18a1P39061 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col18a1P39061 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col18a1P39061 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col18a1P39061 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.94□□□□□ -1.46
Col18a1P39061 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
Col18a1P39061 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col18a1P39061 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col18a1P39061 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col18a1P39061 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col18a1P39061 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.93□□□□□ -1.46
Col18a1P39061 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col18a1P39061 Gm15034-201ENSMUST00000120043 349 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Gm14619-201ENSMUST00000120480 168 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Gm25177-201ENSMUST00000122634 117 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.93□□□□□ -1.46
Col18a1P39061 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col18a1P39061 Igkv11-118-201ENSMUST00000199448 346 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.93□□□□□ -1.46
Col18a1P39061 Gm7692-201ENSMUST00000213534 409 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 AC160865.1-201ENSMUST00000219873 151 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col18a1P39061 Gm23097-201ENSMUST00000083448 105 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col18a1P39061 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col18a1P39061 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col18a1P39061 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col18a1P39061 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col18a1P39061 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col18a1P39061 Gm26300-201ENSMUST00000102282 94 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Gm24281-201ENSMUST00000104234 136 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col18a1P39061 Gm27899-201ENSMUST00000184715 64 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.93□□□□□ -1.46
Col18a1P39061 Gm37682-201ENSMUST00000191776 522 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Gm22897-202ENSMUST00000197782 127 ntBASIC5.93□□□□□ -1.46
Col18a1P39061 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.93□□□□□ -1.46
Col18a1P39061 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col18a1P39061 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col18a1P39061 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Col18a1P39061 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col18a1P39061 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col18a1P39061 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col18a1P39061 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col18a1P39061 Malat1-201ENSMUST00000172812 6983 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
Col18a1P39061 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col18a1P39061 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC5.92□□□□□ -1.46
Col18a1P39061 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col18a1P39061 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col18a1P39061 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 AC132336.1-201ENSMUST00000222844 1740 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col18a1P39061 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 Gm25376-201ENSMUST00000104340 133 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col18a1P39061 Defa-ps1-201ENSMUST00000119062 282 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 Gm3788-201ENSMUST00000119949 136 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 Defa-ps6-201ENSMUST00000122172 282 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col18a1P39061 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC5.92□□□□□ -1.46
Col18a1P39061 Gm16331-201ENSMUST00000144274 498 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 Gm23499-201ENSMUST00000157736 268 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 Gm22392-201ENSMUST00000177971 107 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 Gm23141-201ENSMUST00000178682 94 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col18a1P39061 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC5.92□□□□□ -1.46
Col18a1P39061 AC091260.1-201ENSMUST00000216112 229 ntBASIC5.92□□□□□ -1.46
Col18a1P39061 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC5.92□□□□□ -1.46
Col18a1P39061 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 119.9 ms