Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco4Q9JIS3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smco4Q9JIS3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smco4Q9JIS3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smco4Q9JIS3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Smco4Q9JIS3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Tgds-204ENSMUST00000228543 1594 ntBASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smco4Q9JIS3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Etf1-202ENSMUST00000180351 108 ntBASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco4Q9JIS3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco4Q9JIS3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco4Q9JIS3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smco4Q9JIS3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco4Q9JIS3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco4Q9JIS3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco4Q9JIS3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco4Q9JIS3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco4Q9JIS3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 208.7 ms