Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd3P97770 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Thumpd3P97770 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd3P97770 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Thumpd3P97770 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Thumpd3P97770 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Thumpd3P97770 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd3P97770 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Thumpd3P97770 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.74■□□□□ 0.43
Thumpd3P97770 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd3P97770 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Thumpd3P97770 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd3P97770 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.74■□□□□ 0.43
Thumpd3P97770 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd3P97770 Rab3c-203ENSMUST00000224180 967 ntBASIC17.74■□□□□ 0.43
Thumpd3P97770 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.74■□□□□ 0.43
Thumpd3P97770 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.74■□□□□ 0.43
Thumpd3P97770 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Thumpd3P97770 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.74■□□□□ 0.43
Thumpd3P97770 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd3P97770 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd3P97770 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd3P97770 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.74■□□□□ 0.43
Thumpd3P97770 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd3P97770 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thumpd3P97770 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.73■□□□□ 0.43
Thumpd3P97770 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Thumpd3P97770 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.73■□□□□ 0.43
Thumpd3P97770 Gm26524-201ENSMUST00000192339 390 ntBASIC17.73■□□□□ 0.43
Thumpd3P97770 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Thumpd3P97770 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.73■□□□□ 0.43
Thumpd3P97770 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thumpd3P97770 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.73■□□□□ 0.43
Thumpd3P97770 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.72■□□□□ 0.43
Thumpd3P97770 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd3P97770 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd3P97770 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd3P97770 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd3P97770 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd3P97770 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Thumpd3P97770 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd3P97770 Gm13168-201ENSMUST00000121771 632 ntBASIC17.72■□□□□ 0.43
Thumpd3P97770 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd3P97770 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Thumpd3P97770 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd3P97770 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Thumpd3P97770 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thumpd3P97770 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.71■□□□□ 0.43
Thumpd3P97770 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.71■□□□□ 0.43
Thumpd3P97770 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 Gm37856-201ENSMUST00000191634 999 ntBASIC17.71■□□□□ 0.43
Thumpd3P97770 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Thumpd3P97770 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Thumpd3P97770 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Thumpd3P97770 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Thumpd3P97770 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Thumpd3P97770 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.71■□□□□ 0.42
Thumpd3P97770 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Thumpd3P97770 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Thumpd3P97770 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd3P97770 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.7■□□□□ 0.42
Thumpd3P97770 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd3P97770 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd3P97770 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.7■□□□□ 0.42
Thumpd3P97770 Idnk-204ENSMUST00000226010 1898 ntBASIC17.7■□□□□ 0.42
Thumpd3P97770 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd3P97770 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.7■□□□□ 0.42
Thumpd3P97770 Trmt13-210ENSMUST00000198454 880 ntBASIC17.7■□□□□ 0.42
Thumpd3P97770 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd3P97770 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd3P97770 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Thumpd3P97770 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Thumpd3P97770 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd3P97770 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd3P97770 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Thumpd3P97770 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms