Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Gm27741-201ENSMUST00000185060 237 ntBASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Gm10566-201ENSMUST00000086739 996 ntBASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm11236J3QMS7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm11236J3QMS7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm11236J3QMS7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.24■□□□□ 0.51
Gm11236J3QMS7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gm11236J3QMS7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Gm11236J3QMS7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm11236J3QMS7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm11236J3QMS7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.24■□□□□ 0.51
Gm11236J3QMS7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm11236J3QMS7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11236J3QMS7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11236J3QMS7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11236J3QMS7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11236J3QMS7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.23■□□□□ 0.51
Gm11236J3QMS7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11236J3QMS7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm11236J3QMS7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Gm18958-201ENSMUST00000174258 762 ntBASIC18.22■□□□□ 0.51
Gm11236J3QMS7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.22■□□□□ 0.51
Gm11236J3QMS7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Gm11950-201ENSMUST00000121615 838 ntBASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm11236J3QMS7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.5
Gm11236J3QMS7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.21■□□□□ 0.5
Gm11236J3QMS7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.5
Gm11236J3QMS7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Gm11236J3QMS7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm11236J3QMS7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11236J3QMS7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11236J3QMS7 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.19■□□□□ 0.5
Gm11236J3QMS7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11236J3QMS7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm11236J3QMS7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm11236J3QMS7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms