Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Gm7213-201ENSMUST00000215977 950 ntBASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trappc6aQ78XR0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Gm9013-201ENSMUST00000132939 882 ntBASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Mir1668-201ENSMUST00000184114 107 ntBASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trappc6aQ78XR0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Notumos-201ENSMUST00000151998 2659 ntBASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Gm37025-201ENSMUST00000195159 829 ntBASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Gm9731-201ENSMUST00000209480 747 ntBASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trappc6aQ78XR0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trappc6aQ78XR0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.27■□□□□ 0.36
Trappc6aQ78XR0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trappc6aQ78XR0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trappc6aQ78XR0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.27■□□□□ 0.36
Trappc6aQ78XR0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.27■□□□□ 0.36
Trappc6aQ78XR0 Gm29518-201ENSMUST00000190858 372 ntBASIC17.27■□□□□ 0.36
Trappc6aQ78XR0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.27■□□□□ 0.36
Trappc6aQ78XR0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trappc6aQ78XR0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trappc6aQ78XR0 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.27■□□□□ 0.35
Trappc6aQ78XR0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Trappc6aQ78XR0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trappc6aQ78XR0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trappc6aQ78XR0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trappc6aQ78XR0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trappc6aQ78XR0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trappc6aQ78XR0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trappc6aQ78XR0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trappc6aQ78XR0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trappc6aQ78XR0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trappc6aQ78XR0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trappc6aQ78XR0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trappc6aQ78XR0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trappc6aQ78XR0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trappc6aQ78XR0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms