Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mre11Q61216 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mre11Q61216 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mre11Q61216 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mre11Q61216 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.95■□□□□ 0.94
Mre11Q61216 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Mre11Q61216 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Mre11Q61216 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Mre11Q61216 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mre11Q61216 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mre11Q61216 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mre11Q61216 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mre11Q61216 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mre11Q61216 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Mre11Q61216 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Mre11Q61216 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.94■□□□□ 0.94
Mre11Q61216 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.94■□□□□ 0.94
Mre11Q61216 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Mre11Q61216 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mre11Q61216 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mre11Q61216 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mre11Q61216 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mre11Q61216 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Mre11Q61216 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Mre11Q61216 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.94■□□□□ 0.94
Mre11Q61216 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC20.93■□□□□ 0.94
Mre11Q61216 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.93■□□□□ 0.94
Mre11Q61216 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.93■□□□□ 0.94
Mre11Q61216 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Mre11Q61216 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Mre11Q61216 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.92■□□□□ 0.94
Mre11Q61216 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Mre11Q61216 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Mre11Q61216 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Mre11Q61216 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Gm13241-201ENSMUST00000094493 780 ntBASIC20.92■□□□□ 0.94
Mre11Q61216 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.92■□□□□ 0.94
Mre11Q61216 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.92■□□□□ 0.94
Mre11Q61216 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Mre11Q61216 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mre11Q61216 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC20.91■□□□□ 0.94
Mre11Q61216 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Mre11Q61216 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mre11Q61216 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Mre11Q61216 Gm21956-201ENSMUST00000179946 522 ntBASIC20.91■□□□□ 0.94
Mre11Q61216 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.91■□□□□ 0.94
Mre11Q61216 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mre11Q61216 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mre11Q61216 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.91■□□□□ 0.94
Mre11Q61216 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mre11Q61216 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mre11Q61216 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mre11Q61216 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mre11Q61216 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mre11Q61216 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mre11Q61216 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mre11Q61216 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mre11Q61216 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Mre11Q61216 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.9■□□□□ 0.94
Mre11Q61216 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mre11Q61216 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mre11Q61216 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mre11Q61216 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mre11Q61216 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mre11Q61216 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Mre11Q61216 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.9■□□□□ 0.94
Mre11Q61216 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.9■□□□□ 0.94
Mre11Q61216 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mre11Q61216 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms