Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Thumpd3P97770 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Thumpd3P97770 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Thumpd3P97770 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Gm22240-201ENSMUST00000175225 82 ntBASIC17.79■□□□□ 0.44
Thumpd3P97770 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Thumpd3P97770 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.79■□□□□ 0.44
Thumpd3P97770 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thumpd3P97770 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd3P97770 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd3P97770 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Thumpd3P97770 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Thumpd3P97770 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Thumpd3P97770 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.78■□□□□ 0.44
Thumpd3P97770 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd3P97770 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Thumpd3P97770 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd3P97770 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.78■□□□□ 0.44
Thumpd3P97770 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.78■□□□□ 0.44
Thumpd3P97770 Gm20049-201ENSMUST00000219950 730 ntBASIC17.78■□□□□ 0.44
Thumpd3P97770 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd3P97770 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.78■□□□□ 0.44
Thumpd3P97770 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd3P97770 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd3P97770 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Thumpd3P97770 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd3P97770 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd3P97770 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.78■□□□□ 0.44
Thumpd3P97770 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.78■□□□□ 0.44
Thumpd3P97770 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd3P97770 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Thumpd3P97770 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thumpd3P97770 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd3P97770 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd3P97770 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd3P97770 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd3P97770 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd3P97770 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd3P97770 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd3P97770 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.77■□□□□ 0.44
Thumpd3P97770 Gm8520-201ENSMUST00000186517 868 ntBASIC17.77■□□□□ 0.44
Thumpd3P97770 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.77■□□□□ 0.44
Thumpd3P97770 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd3P97770 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd3P97770 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd3P97770 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Thumpd3P97770 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd3P97770 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thumpd3P97770 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Thumpd3P97770 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.77■□□□□ 0.43
Thumpd3P97770 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Thumpd3P97770 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Thumpd3P97770 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd3P97770 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.76■□□□□ 0.43
Thumpd3P97770 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.76■□□□□ 0.43
Thumpd3P97770 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.76■□□□□ 0.43
Thumpd3P97770 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.76■□□□□ 0.43
Thumpd3P97770 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd3P97770 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd3P97770 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd3P97770 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Thumpd3P97770 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd3P97770 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd3P97770 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd3P97770 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.76■□□□□ 0.43
Thumpd3P97770 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.76■□□□□ 0.43
Thumpd3P97770 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.76■□□□□ 0.43
Thumpd3P97770 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd3P97770 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd3P97770 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Thumpd3P97770 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd3P97770 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd3P97770 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd3P97770 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd3P97770 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Thumpd3P97770 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Thumpd3P97770 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.75■□□□□ 0.43
Thumpd3P97770 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.75■□□□□ 0.43
Thumpd3P97770 Gm22325-201ENSMUST00000158904 308 ntBASIC17.75■□□□□ 0.43
Thumpd3P97770 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Thumpd3P97770 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.75■□□□□ 0.43
Thumpd3P97770 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Thumpd3P97770 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Thumpd3P97770 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms