Protein–RNA interactions for Protein: J3QQ59

Gm3383, Predicted gene 3194, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3383J3QQ59 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm3383J3QQ59 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Gm11950-201ENSMUST00000121615 838 ntBASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3383J3QQ59 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Gm18958-201ENSMUST00000174258 762 ntBASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Gm3383J3QQ59 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3383J3QQ59 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Gm3383J3QQ59 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3383J3QQ59 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3383J3QQ59 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Gm3383J3QQ59 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Gm3383J3QQ59 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3383J3QQ59 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3383J3QQ59 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.83■□□□□ 0.6
Gm3383J3QQ59 Gm7153-201ENSMUST00000117092 455 ntBASIC18.83■□□□□ 0.6
Gm3383J3QQ59 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.83■□□□□ 0.6
Gm3383J3QQ59 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3383J3QQ59 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3383J3QQ59 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3383J3QQ59 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3383J3QQ59 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3383J3QQ59 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3383J3QQ59 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3383J3QQ59 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Gm3383J3QQ59 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.83■□□□□ 0.6
Gm3383J3QQ59 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3383J3QQ59 Rarb-207ENSMUST00000225921 2756 ntBASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3383J3QQ59 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Golph3-205ENSMUST00000228671 2842 ntBASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Gm27357-201ENSMUST00000183754 135 ntBASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3383J3QQ59 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms