Protein–RNA interactions for Protein: Q9R013

Ctsf, Cathepsin F, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtsfQ9R013 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtsfQ9R013 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CtsfQ9R013 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CtsfQ9R013 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtsfQ9R013 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.01■□□□□ 0.63
CtsfQ9R013 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
CtsfQ9R013 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.01■□□□□ 0.63
CtsfQ9R013 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtsfQ9R013 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.01■□□□□ 0.63
CtsfQ9R013 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CtsfQ9R013 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CtsfQ9R013 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19■□□□□ 0.63
CtsfQ9R013 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 Gm27463-201ENSMUST00000183569 57 ntBASIC19■□□□□ 0.63
CtsfQ9R013 Gm10517-202ENSMUST00000192970 758 ntBASIC19■□□□□ 0.63
CtsfQ9R013 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19■□□□□ 0.63
CtsfQ9R013 Gm5828-201ENSMUST00000071842 1860 ntBASIC19■□□□□ 0.63
CtsfQ9R013 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CtsfQ9R013 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CtsfQ9R013 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CtsfQ9R013 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19■□□□□ 0.63
CtsfQ9R013 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19■□□□□ 0.63
CtsfQ9R013 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CtsfQ9R013 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CtsfQ9R013 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CtsfQ9R013 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.99■□□□□ 0.63
CtsfQ9R013 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CtsfQ9R013 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CtsfQ9R013 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CtsfQ9R013 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.99■□□□□ 0.63
CtsfQ9R013 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CtsfQ9R013 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CtsfQ9R013 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CtsfQ9R013 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CtsfQ9R013 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CtsfQ9R013 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.99■□□□□ 0.63
CtsfQ9R013 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CtsfQ9R013 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CtsfQ9R013 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CtsfQ9R013 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CtsfQ9R013 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CtsfQ9R013 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CtsfQ9R013 Gm12085-201ENSMUST00000119263 940 ntBASIC18.98■□□□□ 0.63
CtsfQ9R013 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CtsfQ9R013 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.98■□□□□ 0.63
CtsfQ9R013 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CtsfQ9R013 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CtsfQ9R013 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CtsfQ9R013 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CtsfQ9R013 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CtsfQ9R013 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CtsfQ9R013 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CtsfQ9R013 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.97■□□□□ 0.63
CtsfQ9R013 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CtsfQ9R013 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CtsfQ9R013 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CtsfQ9R013 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CtsfQ9R013 Gm21362-201ENSMUST00000194272 928 ntBASIC18.97■□□□□ 0.63
CtsfQ9R013 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CtsfQ9R013 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CtsfQ9R013 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CtsfQ9R013 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CtsfQ9R013 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CtsfQ9R013 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CtsfQ9R013 Tgds-204ENSMUST00000228543 1594 ntBASIC18.97■□□□□ 0.63
CtsfQ9R013 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CtsfQ9R013 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CtsfQ9R013 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CtsfQ9R013 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CtsfQ9R013 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CtsfQ9R013 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.96■□□□□ 0.63
CtsfQ9R013 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.96■□□□□ 0.63
CtsfQ9R013 Gm45058-201ENSMUST00000205810 766 ntBASIC18.96■□□□□ 0.63
CtsfQ9R013 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CtsfQ9R013 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CtsfQ9R013 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CtsfQ9R013 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CtsfQ9R013 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CtsfQ9R013 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CtsfQ9R013 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CtsfQ9R013 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CtsfQ9R013 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CtsfQ9R013 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CtsfQ9R013 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CtsfQ9R013 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CtsfQ9R013 Gm38027-201ENSMUST00000192315 235 ntBASIC18.95■□□□□ 0.62
CtsfQ9R013 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.95■□□□□ 0.62
CtsfQ9R013 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CtsfQ9R013 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms