Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Upb1Q8VC97 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Upb1Q8VC97 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.06■□□□□ 0.64
Upb1Q8VC97 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upb1Q8VC97 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upb1Q8VC97 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upb1Q8VC97 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Upb1Q8VC97 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Upb1Q8VC97 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Upb1Q8VC97 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Upb1Q8VC97 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Upb1Q8VC97 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.05■□□□□ 0.64
Upb1Q8VC97 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.05■□□□□ 0.64
Upb1Q8VC97 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Upb1Q8VC97 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.05■□□□□ 0.64
Upb1Q8VC97 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upb1Q8VC97 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Upb1Q8VC97 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Gm7889-201ENSMUST00000185591 958 ntBASIC19.04■□□□□ 0.64
Upb1Q8VC97 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.04■□□□□ 0.64
Upb1Q8VC97 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Upb1Q8VC97 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upb1Q8VC97 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upb1Q8VC97 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upb1Q8VC97 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upb1Q8VC97 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upb1Q8VC97 Gm7638-201ENSMUST00000121348 967 ntBASIC19.03■□□□□ 0.64
Upb1Q8VC97 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.03■□□□□ 0.64
Upb1Q8VC97 Gm37025-201ENSMUST00000195159 829 ntBASIC19.03■□□□□ 0.64
Upb1Q8VC97 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.03■□□□□ 0.64
Upb1Q8VC97 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.03■□□□□ 0.64
Upb1Q8VC97 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upb1Q8VC97 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upb1Q8VC97 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Upb1Q8VC97 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Upb1Q8VC97 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.02■□□□□ 0.64
Upb1Q8VC97 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Upb1Q8VC97 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Upb1Q8VC97 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Upb1Q8VC97 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Upb1Q8VC97 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Upb1Q8VC97 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Upb1Q8VC97 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Upb1Q8VC97 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Upb1Q8VC97 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19■□□□□ 0.63
Upb1Q8VC97 Gm10231-201ENSMUST00000181584 441 ntBASIC19■□□□□ 0.63
Upb1Q8VC97 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Gm10175-202ENSMUST00000208752 441 ntBASIC19■□□□□ 0.63
Upb1Q8VC97 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19■□□□□ 0.63
Upb1Q8VC97 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Upb1Q8VC97 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upb1Q8VC97 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Upb1Q8VC97 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms