Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Rtl1Q7M732 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC31.3■■■□□ 2.6
Rtl1Q7M732 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Rtl1Q7M732 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rtl1Q7M732 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rtl1Q7M732 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rtl1Q7M732 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
Rtl1Q7M732 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Rtl1Q7M732 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rtl1Q7M732 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rtl1Q7M732 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
Rtl1Q7M732 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC31.28■■■□□ 2.6
Rtl1Q7M732 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC31.28■■■□□ 2.6
Rtl1Q7M732 Gm42900-201ENSMUST00000197184 2167 ntBASIC31.28■■■□□ 2.6
Rtl1Q7M732 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rtl1Q7M732 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Rtl1Q7M732 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rtl1Q7M732 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC31.27■■■□□ 2.6
Rtl1Q7M732 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rtl1Q7M732 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Rtl1Q7M732 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rtl1Q7M732 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC31.27■■■□□ 2.6
Rtl1Q7M732 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Rtl1Q7M732 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC31.27■■■□□ 2.6
Rtl1Q7M732 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Rtl1Q7M732 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Rtl1Q7M732 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC31.27■■■□□ 2.6
Rtl1Q7M732 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Rtl1Q7M732 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rtl1Q7M732 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
Rtl1Q7M732 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.6
Rtl1Q7M732 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rtl1Q7M732 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rtl1Q7M732 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rtl1Q7M732 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rtl1Q7M732 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rtl1Q7M732 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rtl1Q7M732 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rtl1Q7M732 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rtl1Q7M732 Gm2274-201ENSMUST00000184539 609 ntBASIC31.25■■■□□ 2.59
Rtl1Q7M732 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Rtl1Q7M732 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rtl1Q7M732 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Rtl1Q7M732 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rtl1Q7M732 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rtl1Q7M732 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
Rtl1Q7M732 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rtl1Q7M732 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rtl1Q7M732 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rtl1Q7M732 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Rtl1Q7M732 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC31.24■■■□□ 2.59
Rtl1Q7M732 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rtl1Q7M732 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rtl1Q7M732 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
Rtl1Q7M732 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Rtl1Q7M732 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rtl1Q7M732 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rtl1Q7M732 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rtl1Q7M732 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Rtl1Q7M732 Gm43808-201ENSMUST00000202534 2065 ntBASIC31.23■■■□□ 2.59
Rtl1Q7M732 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Rtl1Q7M732 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Rtl1Q7M732 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rtl1Q7M732 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rtl1Q7M732 Gm37811-201ENSMUST00000192416 2601 ntBASIC31.23■■■□□ 2.59
Rtl1Q7M732 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Rtl1Q7M732 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rtl1Q7M732 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rtl1Q7M732 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rtl1Q7M732 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rtl1Q7M732 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rtl1Q7M732 Mir1668-201ENSMUST00000184114 107 ntBASIC31.22■■■□□ 2.59
Rtl1Q7M732 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rtl1Q7M732 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC31.22■■■□□ 2.59
Rtl1Q7M732 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rtl1Q7M732 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rtl1Q7M732 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rtl1Q7M732 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Rtl1Q7M732 Gm6345-202ENSMUST00000180900 204 ntBASIC31.21■■■□□ 2.59
Rtl1Q7M732 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rtl1Q7M732 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Rtl1Q7M732 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rtl1Q7M732 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC31.21■■■□□ 2.59
Rtl1Q7M732 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Rtl1Q7M732 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
Rtl1Q7M732 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Rtl1Q7M732 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Rtl1Q7M732 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Rtl1Q7M732 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Rtl1Q7M732 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Rtl1Q7M732 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Rtl1Q7M732 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Rtl1Q7M732 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC31.19■■■□□ 2.58
Rtl1Q7M732 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC31.19■■■□□ 2.58
Rtl1Q7M732 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Rtl1Q7M732 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC31.19■■■□□ 2.58
Rtl1Q7M732 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Rtl1Q7M732 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
Rtl1Q7M732 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC31.18■■■□□ 2.58
Rtl1Q7M732 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms