Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mre11Q61216 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Mre11Q61216 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mre11Q61216 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Mre11Q61216 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mre11Q61216 Gm12251-201ENSMUST00000117893 792 ntBASIC21■□□□□ 0.95
Mre11Q61216 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mre11Q61216 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mre11Q61216 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21■□□□□ 0.95
Mre11Q61216 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC21■□□□□ 0.95
Mre11Q61216 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Mre11Q61216 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Mre11Q61216 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Mre11Q61216 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21■□□□□ 0.95
Mre11Q61216 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21■□□□□ 0.95
Mre11Q61216 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21■□□□□ 0.95
Mre11Q61216 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mre11Q61216 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mre11Q61216 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Mre11Q61216 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mre11Q61216 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mre11Q61216 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.99■□□□□ 0.95
Mre11Q61216 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC20.99■□□□□ 0.95
Mre11Q61216 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mre11Q61216 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Mre11Q61216 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.98■□□□□ 0.95
Mre11Q61216 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.98■□□□□ 0.95
Mre11Q61216 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Smad6-203ENSMUST00000179458 273 ntBASIC20.98■□□□□ 0.95
Mre11Q61216 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
Mre11Q61216 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Mre11Q61216 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Mre11Q61216 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mre11Q61216 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mre11Q61216 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mre11Q61216 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Mre11Q61216 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Mre11Q61216 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Mre11Q61216 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mre11Q61216 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mre11Q61216 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Mre11Q61216 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Mre11Q61216 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mre11Q61216 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mre11Q61216 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mre11Q61216 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.97■□□□□ 0.95
Mre11Q61216 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Mre11Q61216 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Gm12922-201ENSMUST00000120626 809 ntBASIC20.96■□□□□ 0.95
Mre11Q61216 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.96■□□□□ 0.95
Mre11Q61216 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.96■□□□□ 0.95
Mre11Q61216 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.96■□□□□ 0.95
Mre11Q61216 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Mre11Q61216 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mre11Q61216 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.95■□□□□ 0.94
Mre11Q61216 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Mre11Q61216 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Mre11Q61216 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Mre11Q61216 Gm22325-201ENSMUST00000158904 308 ntBASIC20.95■□□□□ 0.94
Mre11Q61216 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Mre11Q61216 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.95■□□□□ 0.94
Mre11Q61216 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Mre11Q61216 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms