Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lrif1Q8CDD9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lrif1Q8CDD9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lrif1Q8CDD9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Gm38205-201ENSMUST00000192243 258 ntBASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lrif1Q8CDD9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Lrif1Q8CDD9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lrif1Q8CDD9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lrif1Q8CDD9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lrif1Q8CDD9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Gm7290-201ENSMUST00000104990 617 ntBASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Gm12918-201ENSMUST00000120234 636 ntBASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Gm13534-201ENSMUST00000121169 513 ntBASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Gm15710-201ENSMUST00000121821 636 ntBASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Mir5133-201ENSMUST00000174955 77 ntBASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Gm5075-201ENSMUST00000196916 622 ntBASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lrif1Q8CDD9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 114.2 ms