Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mre11Q61216 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mre11Q61216 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mre11Q61216 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Mre11Q61216 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mre11Q61216 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Mre11Q61216 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mre11Q61216 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mre11Q61216 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mre11Q61216 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Mre11Q61216 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Mre11Q61216 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Mre11Q61216 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC21.07■□□□□ 0.96
Mre11Q61216 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC21.07■□□□□ 0.96
Mre11Q61216 Gm11421-201ENSMUST00000122124 294 ntBASIC21.07■□□□□ 0.96
Mre11Q61216 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Mre11Q61216 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mre11Q61216 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mre11Q61216 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Mre11Q61216 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC21.06■□□□□ 0.96
Mre11Q61216 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Mre11Q61216 Shroom3-211ENSMUST00000225438 5742 ntBASIC21.06■□□□□ 0.96
Mre11Q61216 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mre11Q61216 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mre11Q61216 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mre11Q61216 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mre11Q61216 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.06■□□□□ 0.96
Mre11Q61216 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mre11Q61216 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mre11Q61216 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Mre11Q61216 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mre11Q61216 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mre11Q61216 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mre11Q61216 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Mre11Q61216 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Mre11Q61216 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Mre11Q61216 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Mre11Q61216 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mre11Q61216 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Mre11Q61216 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mre11Q61216 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mre11Q61216 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Mre11Q61216 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mre11Q61216 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mre11Q61216 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mre11Q61216 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.04■□□□□ 0.96
Mre11Q61216 Gm38205-201ENSMUST00000192243 258 ntBASIC21.04■□□□□ 0.96
Mre11Q61216 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mre11Q61216 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mre11Q61216 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Mre11Q61216 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Mre11Q61216 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.03■□□□□ 0.96
Mre11Q61216 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Mre11Q61216 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Mre11Q61216 Gm8839-201ENSMUST00000121279 1645 ntBASIC21.03■□□□□ 0.96
Mre11Q61216 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mre11Q61216 Gm9867-201ENSMUST00000192212 2647 ntBASIC21.03■□□□□ 0.96
Mre11Q61216 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Mre11Q61216 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.03■□□□□ 0.96
Mre11Q61216 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Mre11Q61216 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mre11Q61216 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mre11Q61216 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Mre11Q61216 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mre11Q61216 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mre11Q61216 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mre11Q61216 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC21.02■□□□□ 0.96
Mre11Q61216 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
Mre11Q61216 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mre11Q61216 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Mre11Q61216 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mre11Q61216 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Mre11Q61216 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Mre11Q61216 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Mre11Q61216 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Mre11Q61216 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.01■□□□□ 0.95
Mre11Q61216 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.01■□□□□ 0.95
Mre11Q61216 Gm9847-201ENSMUST00000052528 599 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms