Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Znf235Q61116 Gm17661-201ENSMUST00000170317 270 ntBASIC18.45■□□□□ 0.54
Znf235Q61116 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Znf235Q61116 Mir5130-201ENSMUST00000175160 84 ntBASIC18.45■□□□□ 0.54
Znf235Q61116 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Znf235Q61116 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Znf235Q61116 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Znf235Q61116 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.45■□□□□ 0.54
Znf235Q61116 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Znf235Q61116 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Znf235Q61116 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Znf235Q61116 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.44■□□□□ 0.54
Znf235Q61116 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.44■□□□□ 0.54
Znf235Q61116 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.44■□□□□ 0.54
Znf235Q61116 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Znf235Q61116 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.44■□□□□ 0.54
Znf235Q61116 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.44■□□□□ 0.54
Znf235Q61116 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Znf235Q61116 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.44■□□□□ 0.54
Znf235Q61116 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Znf235Q61116 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.43■□□□□ 0.54
Znf235Q61116 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.43■□□□□ 0.54
Znf235Q61116 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Znf235Q61116 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Znf235Q61116 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Znf235Q61116 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.43■□□□□ 0.54
Znf235Q61116 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.43■□□□□ 0.54
Znf235Q61116 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.43■□□□□ 0.54
Znf235Q61116 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Znf235Q61116 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Znf235Q61116 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Znf235Q61116 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.43■□□□□ 0.54
Znf235Q61116 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Znf235Q61116 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Znf235Q61116 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Znf235Q61116 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Znf235Q61116 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Znf235Q61116 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Znf235Q61116 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Znf235Q61116 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Znf235Q61116 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.42■□□□□ 0.54
Znf235Q61116 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Znf235Q61116 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Znf235Q61116 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Znf235Q61116 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Znf235Q61116 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Znf235Q61116 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Znf235Q61116 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Znf235Q61116 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Znf235Q61116 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Znf235Q61116 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Znf235Q61116 Gm16061-201ENSMUST00000122167 857 ntBASIC18.41■□□□□ 0.54
Znf235Q61116 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.41■□□□□ 0.54
Znf235Q61116 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Znf235Q61116 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.41■□□□□ 0.54
Znf235Q61116 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Znf235Q61116 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Znf235Q61116 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Znf235Q61116 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Znf235Q61116 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.41■□□□□ 0.54
Znf235Q61116 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Znf235Q61116 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Znf235Q61116 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Znf235Q61116 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.4■□□□□ 0.54
Znf235Q61116 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Znf235Q61116 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Znf235Q61116 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Znf235Q61116 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Znf235Q61116 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Znf235Q61116 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Znf235Q61116 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Znf235Q61116 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Znf235Q61116 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Znf235Q61116 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Znf235Q61116 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Znf235Q61116 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Znf235Q61116 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Znf235Q61116 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Znf235Q61116 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Znf235Q61116 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.39■□□□□ 0.53
Znf235Q61116 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Znf235Q61116 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Znf235Q61116 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Znf235Q61116 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms